OpenImageAnalysisGroup / IAPLinks
The Integrated Analysis Platform for high-throughput plant image analysis
☆14Updated 5 years ago
Alternatives and similar repositories for IAP
Users that are interested in IAP are comparing it to the libraries listed below
Sorting:
- An explainable Deep Machine Vision framework for Plant Stress Phenotyping☆15Updated 4 years ago
- Plant Phenotyping APP☆45Updated 11 months ago
- Agricultural datasets☆135Updated last month
- Miriam is an open-source isothermal amplification platform☆25Updated 4 years ago
- Geomorph is a software package for performing all stages of geometric morphometric shape analysis of landmark points and curves in 2-and-…☆80Updated 3 months ago
- Galaxy Docker repository with Imaging tools (Galaxy Imaging flavour)☆12Updated 6 years ago
- ImageJ Macro Scripts showcased during Image Processing and Analysis for Life Scientists MOOC on EdX☆26Updated 5 years ago
- Digital Imaging of Root Traits: Extract trait measurements from images of monocot and dicot roots.☆25Updated last year
- RootPainter: Deep Learning Segmentation of Biological Images with Corrective Annotation☆68Updated 2 months ago
- LeafMachine2 is a modular suite of computer vision and machine learning algorithms that enables efficient identification, location, and m…☆29Updated 8 months ago
- Mathematical Morphology in Any Number of Dimensions☆39Updated last year
- Phenomenal: An automatic open source library for 3D shoot architecture reconstruction and analysis for image-based plant phenotyping☆39Updated last week
- Forkable teaching materials for course on working with data in R☆84Updated this week
- An Open-source Arduino-based multispectral camera☆27Updated 7 years ago
- Data and code used in the paper "Robust soil mapping at the farm scale using vis–NIR spectroscopy"☆10Updated 4 years ago
- Shiny App for comparison of samples☆53Updated last year
- Leaf recognition with inner distance shape context☆32Updated 12 years ago
- Automated Morphometrics: image segmentation, 2D and 3D shape extraction, classification, and analysis☆27Updated 5 years ago
- A Shiny Application for Modeling and Visualization of Large-Scale Biological Data☆12Updated 7 months ago
- MiToBo - A microscope image analysis toolbox☆13Updated 6 months ago
- Image Segmentation using Superpixels, Affinity Propagation and Kmeans Clustering☆20Updated 2 years ago
- Image Processing with Python☆110Updated this week
- Code for simulating a multi-view acquisition including attenuation, convolution, reduced sampling and poission noise☆12Updated 3 years ago
- Motion Detection using OpenCV and python☆13Updated 8 years ago
- R interface to the Paleobiology Database☆45Updated 2 weeks ago
- An R package for quantifying color pattern variation☆34Updated last year
- Teaching materials for classes teaching programming to biologists☆54Updated 2 years ago
- Agile energy dense agricultural robot design plans and open source code repository☆33Updated last year
- Ecology Workshop Overview☆21Updated this week
- Image processing toolbox for R☆75Updated 11 months ago