Alternatives and similar repositories for me-ica

Users that are interested in me-ica are comparing it to the libraries listed below

• psiden / BFAST3D

  View on GitHub
  BFAST3D: Bayesian Fast Accurate Spatial Tricks in 3D. For fMRI analysis.
  ☆10Sep 30, 2020Updated 5 years ago
• ME-ICA / tedana

  View on GitHub
  TE-dependent analysis of multi-echo fMRI
  ☆179Updated this week
• atdemarco / svrlsmgui

  View on GitHub
  A graphical multivariate lesion-symptom mapping toolbox
  ☆12Aug 27, 2025Updated 5 months ago
• qinqinyang / MOST-DL

  View on GitHub
  Example codes and data for motion-robust T2 mapping using MOST-DL
  ☆13Jun 7, 2022Updated 3 years ago
• nih-fmrif / bids-b0-tools

  View on GitHub
  Scripts, tools, and documents on creating, parsing, and working with BIDS-structured data sets.
  ☆13Oct 30, 2019Updated 6 years ago
• samsrf / samsrf

  View on GitHub
  ☆15Oct 13, 2025Updated 4 months ago
• CMRR-C2P / MB

  View on GitHub
  Support for CMRR multi-band pulse sequences
  ☆60Mar 10, 2025Updated 11 months ago
• LewisNeuro / HRAN

  View on GitHub
  We created a model to remove physiological noise in fast fMRI without external reference signals.
  ☆12Oct 21, 2019Updated 6 years ago
• justingardner / mrTools

  View on GitHub
  mrTools - matlab based tools for fMRI
  ☆20Apr 4, 2025Updated 10 months ago
• lamyj / mrsd

  View on GitHub
  A toolkit to generate MR sequence diagrams
  ☆15Mar 16, 2023Updated 2 years ago
• sunhongfu / deepMRI

  View on GitHub
  MRI reconstruction (e.g., QSM) using deep learning methods
  ☆39Jul 7, 2025Updated 7 months ago
• magland / sequencetree4

  View on GitHub
  SequenceTree version 4
  ☆20May 18, 2015Updated 10 years ago
• mrirecon / view

  View on GitHub
  Image Viewer for BART
  ☆23Aug 13, 2025Updated 6 months ago
• KMarshallX / VesselBoost

  View on GitHub
  Python-based software utilizing deep learning techniques to segment high-resolution time-of-flight MRI angiography data with high sensiti…
  ☆25Dec 8, 2025Updated 2 months ago
• paquiteau / patch-denoising

  View on GitHub
  Patch based denoising method, targeting fMRI thermal noise removal.
  ☆25Dec 19, 2025Updated last month
• maartenmennes / ICA-AROMA

  View on GitHub
  ICA-AROMA Software Package: a data-driven method to identify and remove head motion-related artefacts from functional MRI data.
  ☆104May 17, 2024Updated last year
• ashimakeshava / neuro_datasci

  View on GitHub
  Action Cognition & Computation Coursework SS2021
  ☆21Nov 11, 2022Updated 3 years ago
• Neurophysics-CFIN / MP-PCA-Denoising

  View on GitHub
  Matlab implementation of Marchenko Pastur denoising (Veraart et al, NeuroImage 142 (2016) 394–406)
  ☆35Nov 28, 2024Updated last year
• ExploreASL / ExploreASL

  View on GitHub
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆58Updated this week
• fluese / reconstructionPipeline

  View on GitHub
  This is a reconstruction pipeline to reconstruct raw MRI data acquired with a Siemens MR scanner using gradient recalled echo (GRE) seque…
  ☆29Oct 16, 2019Updated 6 years ago
• hMRI-group / hMRI-toolbox

  View on GitHub
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆77Feb 2, 2026Updated last week
• payampiray / cbm

  View on GitHub
  computational and brain/behavior modeling
  ☆32Dec 14, 2025Updated 2 months ago
• pulseq / pulseq

  View on GitHub
  Open source framework for pulse sequences
  ☆239Jan 19, 2026Updated 3 weeks ago
• trislett / TFCE_mediation

  View on GitHub
  Fast regression and mediation analysis of vertex or voxel MRI data with TFCE
  ☆31May 21, 2023Updated 2 years ago
• mathieuboudreau / qsm-tools

  View on GitHub
  List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data
  ☆74May 19, 2023Updated 2 years ago
• cest-sources / CEST_EVAL

  View on GitHub
  ☆12Oct 23, 2023Updated 2 years ago
• 18573462816 / MEBCRN

  View on GitHub
  Deep learning network MEBCRN for separation of fat and water magnetic resonance images
  ☆11Dec 29, 2020Updated 5 years ago
• dangom / mr-sequence-diagrams

  View on GitHub
  Draw MR Sequence Diagrams for LaTeX / MetaPost
  ☆34Jul 3, 2020Updated 5 years ago
• baribault / matstanlib

  View on GitHub
  A library of MATLAB functions for visualization, processing, and analysis of output from Bayesian models fit with Stan.
  ☆10Dec 17, 2021Updated 4 years ago
• mgolbabaee / CoverBLIP

  View on GitHub
  Golbabaee M., Chen Z., Wiaux Y. and Davies M., CoverBLIP accelerated and scalable iterative matched filtering for Magnetic Resonance Fing…
  ☆10Jul 26, 2018Updated 7 years ago
• panakino / robust-ALOHA

  View on GitHub
  Denoising of Impulsive noise in single/multichannel images
  ☆11Dec 7, 2017Updated 8 years ago
• tomfletcher / GeometryOfData

  View on GitHub
  ☆10Updated this week
• demidenm / PyReliMRI

  View on GitHub
  Python-based Reliability in MRI: Calculating Group level and Individual Level Similarity between runs and sessions.
  ☆37Sep 24, 2025Updated 4 months ago
• sunhongfu / QSM

  View on GitHub
  Hongfu Sun's MATLAB codes for QSM reconstruction pipeline.
  ☆77Mar 26, 2025Updated 10 months ago
• ben-domingue / irw

  View on GitHub
  Code related to data for the Item Response Warehouse
  ☆11Updated this week
• FuyixueWang / 3D-EPTI

  View on GitHub
  Reconstruction codes for 3D-EPTI method
  ☆12Jun 15, 2021Updated 4 years ago
• eribean / RyStats

  View on GitHub
  A collection of statistical functions writtten in python
  ☆13Oct 29, 2021Updated 4 years ago
• jonbmartin / pulpy

  View on GitHub
  Pulses in Python
  ☆13Oct 24, 2024Updated last year
• spisakt / pTFCE_spm

  View on GitHub
  pTFCE SPM Toolbox
  ☆12Jan 2, 2020Updated 6 years ago