Alternatives and similar repositories for TPHATE

Users that are interested in TPHATE are comparing it to the libraries listed below

• LindenParkesLab / nctpy
  A toolbox for implementing Network Control Theory analyses in python
  ☆62Updated 11 months ago
• ShanechiLab / torchDFINE
  ☆30Updated last year
• OscillationMethods / OscillationMethods
  Methodological considerations for analyzing and interpreting neural oscillations.
  ☆31Updated last year
• snel-repo / autolfads-tf2
  A TensorFlow 2.0 implementation of Latent Factor Analysis via Dynamical Systems (LFADS) and AutoLFADS.
  ☆21Updated last year
• ShanechiLab / PyPSID
  Preferential Subspace Identification Algorithm
  ☆53Updated last month
• ahwillia / tensortools
  A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA
  ☆35Updated last year
• brainets / netchos
  Network plotting python package
  ☆12Updated 3 years ago
• arthur-pe / slicetca
  Library to perform Slice Tensor Component Analysis (sliceTCA)
  ☆53Updated 4 months ago
• amnsbr / cubnm
  A toolbox for brain network modeling on GPUs
  ☆14Updated this week
• egokcen / mDLAG
  A dimensionality reduction framework for characterizing the multi-dimensional, concurrent flow of signals across multiple neuronal popula…
  ☆16Updated 3 months ago
• snel-repo / neural-data-transformers
  ☆78Updated 3 years ago
• neurallatents / nlb_workshop
  ☆20Updated 3 years ago
• AlGoulas / bio2art
  Convert biological neuronal networks to artificial recurrent neuronal networks
  ☆21Updated 3 years ago
• LegrandNico / hmm-mne
  Hidden Markov Modelling of M/EEG data.
  ☆17Updated 4 years ago
• montaltoalessandro / MuTE
  ☆11Updated 7 years ago
• JohnGriffiths / mne-dcm
  Dynamic Causal Modelling for MNE and the nipy ecosystem
  ☆21Updated 7 years ago
• DurstewitzLab / dendPLRNN
  ☆20Updated last year
• rdgao / field-echos
  Project code for extracting neural population timescale from field potential data (LFP, ECoG, etc)
  ☆18Updated 3 years ago
• gyyang / olfaction_evolution
  ☆20Updated 3 years ago
• Dynamics-of-Neural-Systems-Lab / MARBLE
  Package for the data-driven representation of non-linear dynamics over manifolds based on a statistical distribution of local phase portr…
  ☆75Updated 4 months ago
• Imperial-MIND-lab / integrated-info-decomp
  Python package for Integrated Information Decomposition (PhiID)
  ☆21Updated last year
• tmdemelo / pydcm
  Dynamic Causal Modeling with Python
  ☆40Updated 5 years ago
• egokcen / DLAG
  A dimensionality reduction framework for disentangling the flow of signals between populations of neurons
  ☆32Updated 2 months ago
• brain-modelling-group / neural-flows
  Estimation, analysis and decomposition of brainwave spatiotemporal dynamics
  ☆29Updated 4 years ago
• OHBA-analysis / osl-dynamics
  Methods for studying dynamic functional brain activity in neuroimaging data.
  ☆70Updated last week
• multinetlab-amsterdam / network_TDA_tutorial
  This repository is dedicated for the tutorial on network and topological neuroscience.
  ☆69Updated last year
• canlab / Lindquist_Dynamic_Correlation
  Martin Lindquist's dynamic correlation toolboxes. Designed for fMRI analysis, useful for other applications too.
  ☆36Updated 5 years ago
• snel-repo / ComputationThroughDynamicsBenchmark
  ☆22Updated last month
• jniediek / combinato
  Automatic spike sorting, cluster visualization, spike sorting GUIs
  ☆44Updated last year
• adrian-valente / lowrank_inference
  Fitting low-rank RNNs to neural trajectories (LINT method).
  ☆18Updated 3 months ago