Simple Molecular Dynamics code for Discovery-Driven approach to real gas properties.
☆24Aug 23, 2022Updated 3 years ago
Alternatives and similar repositories for MolecularDynamics
Users that are interested in MolecularDynamics are comparing it to the libraries listed below
Sorting:
- Some C++ code for basic Molecular Dynamics simulations.☆11Sep 12, 2018Updated 7 years ago
- Markov State Models on the Muller potential: a MSMBuilder Tutorial☆12Mar 18, 2013Updated 12 years ago
- PETSc-FEM Is a general purpose, parallel, multi-physics finite element program developped at CIMEC☆15Jan 7, 2026Updated last month
- Lava is a general-purpose calculator that provides a python interface to enable one-click calculation of the many common properties with …☆17May 31, 2022Updated 3 years ago
- This repository provides source code with solutions to all relevant exercises in the book entitled "A Computational Introduction to Quant…☆17Feb 17, 2026Updated last week
- 4th-order Runge-Kutta method for solving the first-order ordinary differential equation (MATLAB)☆20Dec 19, 2023Updated 2 years ago
- Molecular Dynamics Simulation of Alanine Dipeptide and Dihedral Angle Analysis☆19Jan 2, 2024Updated 2 years ago
- Robust and stable clustering of molecular dynamics simulation trajectories.☆19Sep 2, 2022Updated 3 years ago
- Some of useful tcl scripts to analyse data from VMD☆15Aug 2, 2022Updated 3 years ago
- Assessing the impact of mutations on antibody-antigen binding affinity☆18Dec 7, 2020Updated 5 years ago
- A Tutorial for quasi Markov State Model(qMSM) developed by Huang Group, Dept of Chemistry at UW-Madison☆19Jun 6, 2023Updated 2 years ago
- Introductory course on the Vienna Ab Initio Simulation Package (VASP) given by Dr. Federico Dattila at the Institute of Chemical Research…☆30Oct 30, 2022Updated 3 years ago
- Repository for code featured in "Machine Learning Assisted Optimization Methods for Automated Antenna Design"☆10Dec 28, 2024Updated last year
- Files used in TMP Chem videos on physical chemistry☆30May 30, 2014Updated 11 years ago
- a tool for creating Molecular Dynamics-ready models of polymeric systems☆23Feb 25, 2019Updated 7 years ago
- Vector Fitting Tool in MATLAB☆11Jun 28, 2019Updated 6 years ago
- pyKVFinder: Python-C parallel KVFinder☆35Jan 28, 2026Updated last month
- Contains all the MATLAB Code written in Numerical Methods for PDE☆30Sep 8, 2021Updated 4 years ago
- Parallel Lammps Python interface - control a mpi4py parallel LAMMPS instance from a serial python process or a Jupyter notebook - based o…☆36Updated this week
- ☆12Nov 8, 2025Updated 3 months ago
- This program computes the sum-frequency generation (SFG) spectrum for a give MD trajectory of interfacial water molecules. The program ca…☆12Jul 24, 2023Updated 2 years ago
- ☆10Feb 18, 2020Updated 6 years ago
- Chemical Engineering at UP LaTeX templates☆10Sep 12, 2021Updated 4 years ago
- Basic implementation 4th order Runge Kutta method for ODE's☆11Oct 27, 2021Updated 4 years ago
- ☆10Jan 20, 2026Updated last month
- Python and MATLAB code for time domain vector fitting☆13Feb 20, 2017Updated 9 years ago
- This repository is the official implementation of Topology-Informed Graph Transformer (Choi et al., GRaM Workshop at ICML 2024).☆12Dec 28, 2024Updated last year
- This software package simulates the reduction of graphene oxide and calculates the optical response of the generated sp2 domains☆11Dec 22, 2016Updated 9 years ago
- Examples LAMMPS simulations to generate thermodynamic properties of simple molecular models☆87Nov 9, 2021Updated 4 years ago
- Etomica is a molecular simulation framework written in Java, developed at the Department of Chemical & Biological Engineering at the Uni…☆16Updated this week
- A collection of tools for pre-processing, simulating, and post-processing vascular fluid-structure-interaction problems☆14Dec 15, 2025Updated 2 months ago
- EvoEF + evolutionary profile for ddG_bind prediction☆14Oct 17, 2025Updated 4 months ago
- A python script to perform QM/MM calculation.☆13Updated this week
- Development of a numerical model to characterize the coupled energy and mass transfer occur during the process of drying a freshly sliced…☆12Sep 29, 2019Updated 6 years ago
- Author: Nathan Totorica Date: 5/14/2021 # Singularity Matrix Pertubation (SMP) This code was written for a class project in the course e…☆10May 14, 2021Updated 4 years ago
- A tool to draw Graphene Oxide 3D chemical structures. (Python 2.7)☆11Nov 27, 2017Updated 8 years ago
- A Python3 script for removal of outlier sequences from a multiple sequence alignment (FASTA format).☆10Jan 26, 2025Updated last year
- A toolkit to bulk-submission, download, analysis and summarizing data from abYsis.org☆10Apr 20, 2020Updated 5 years ago
- atomes: codeblocks dev files☆15Updated this week