Python Suite for Advanced General Ensemble Simulations
☆109Oct 5, 2026Updated this week
Alternatives and similar repositories for PySAGES
Users that are interested in PySAGES are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Software Suite for Advanced General Ensemble Simulations☆94Feb 24, 2023Updated 3 years ago
- ☆11Sep 30, 2026Updated last week
- Adaptive sampling algorithms for molecular transitions☆30Jun 28, 2026Updated 3 months ago
- Program Package for Sampling, Training and Applying ML-based Potential models☆13Aug 13, 2026Updated last month
- Alchemical machine learning interatomic potentials☆39Nov 8, 2024Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Torch-native, batchable, atomistic simulations.☆502Updated this week
- [NeurIPS 2024] Official implementation of the Efficiently Scaled Attention Interatomic Potential☆60Sep 26, 2025Updated last year
- Enhanced sampling in the representation space of atomistic neural networks.☆17Updated this week
- ASE framework for Monte Carlo simulations with machine learned interatomic potentials☆30Sep 24, 2026Updated 2 weeks ago
- ☆140May 3, 2026Updated 5 months ago
- ☆14Jun 4, 2024Updated 2 years ago
- Deep Modeling for Molecular Simulation 2023, four-day in-person workshop, July 11-14, 2023☆25Jul 14, 2023Updated 3 years ago
- ASH is a Python-based computational chemistry and QM/MM environment, primarily for molecular calculations in the gas phase, explicit sol…☆130Updated this week
- A universal ML model to predict molecular dynamics trajectories with long time steps☆57Sep 23, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Deep Supervised Graph Partitioning Model☆14Aug 3, 2021Updated 5 years ago
- Training Neural Network potentials through customizable routines in JAX.☆73Updated this week
- Compute neighbor lists for atomistic systems☆87Updated this week
- A Python software package for saddle point optimization and minimization of atomic systems.☆182Sep 2, 2026Updated last month
- STable AutoCorrelation Integral Estimator for time-correlated data☆20Sep 25, 2026Updated 2 weeks ago
- Coarse-Grained SMILES (CGsmiles) A Versatile Line Notation for Molecular Representations Across Multiple Resolutions☆18Oct 2, 2026Updated last week
- Fast, hackable neural-network force fields and molecular dynamics in JAX.☆47Sep 29, 2026Updated last week
- A unified framework for machine learning collective variables for enhanced sampling simulations☆145Oct 2, 2026Updated last week
- SevenNet - a graph neural network interatomic potential package supporting efficient multi-GPU parallel molecular dynamics simulations.☆275Updated this week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆12Jan 1, 2019Updated 7 years ago
- MLP training for molecular systems☆61Updated this week
- scalable molecular simulation☆143Apr 28, 2026Updated 5 months ago
- Automated reaction mechanism generator and general boxed molecular dynamics package for accelerated sampling in molecular dynamics simula…☆16Jul 28, 2021Updated 5 years ago
- CUDA-accelerated radial distribution functions using NVIDIA ALCHEMI Toolkit-Ops O(N) neighbor lists and PyTorch.☆34Jun 9, 2026Updated 4 months ago
- An automated enhanced sampling generation of training sets for chemically reactive machine learning interatomic potentials☆23Jun 6, 2026Updated 4 months ago
- jobflow-remote is a Python package to run jobflow workflows on remote resources.☆42Updated this week
- MCMC-based algorithm for sampling surface reconstructions☆46Mar 1, 2026Updated 7 months ago
- Python package to construct free energy profiles from biased molecular simulation data using both log-likelihood maximization and self-co…☆22Jun 27, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- JAX implementation of the NequIP neural network interatomic potential☆17Feb 24, 2026Updated 7 months ago
- Machine-Learned Interatomic Potential eXploration (mlipx) is designed at BASF for evaluating machine-learned interatomic potentials (MLIP…☆108Jan 28, 2026Updated 8 months ago
- example demonstrating a free energy estimation starting from OFF and OpenMM☆12Oct 21, 2020Updated 5 years ago
- SubPEx (Sub-Pocket Explorer) is a tool to enhance ensemble (multiple-receptor/relaxed-complex) virtual screening. It uses weighted ensemb…☆18Jun 30, 2025Updated last year
- ☆33Nov 10, 2023Updated 2 years ago
- ☆22May 7, 2025Updated last year
- End-To-End Molecular Dynamics (MD) Engine using PyTorch☆719Apr 21, 2026Updated 5 months ago