FZJ-IEK3-VSA / citation-graph-builderLinks
A tool for the creation and visualization of citation networks which combines citation data obtained from parsing the paper's PDF files and querying bibliographic APIs.
☆14Updated 2 years ago
Alternatives and similar repositories for citation-graph-builder
Users that are interested in citation-graph-builder are comparing it to the libraries listed below
Sorting:
- Pip-installable Python package to automate handsearching and citation searching for systematic reviews.☆12Updated 10 months ago
- Interesting Scientific Idea Generation Using Knowledge Graphs and LLMs: Evaluations with 100 Research Group Leaders☆22Updated 4 months ago
- A Model Control Protocol (MCP) connector for integrating your local Zotero with Claude☆39Updated 2 months ago
- ☆19Updated 2 months ago
- This Network-graph based literature review tool uses the open-source version of Neo4j with Jupyter Notebooks written in Python to import …☆11Updated last year
- Template for creating a BioCypher-driven knowledge graph☆12Updated this week
- This is a repo for migration of CROssBAR data to the Neo4j database via BioCypher☆9Updated last month
- Collection of National Science Foundation (NSF) proposal templates: pitches, general applications, etc.☆13Updated last year
- Whole-cell modeling tutorials☆16Updated 4 years ago
- NXOntology data: making ontologies accessible as simple JSON files☆14Updated last week
- Code that parses datasets from various sources and converts them to load graph databases.☆16Updated this week
- Python package for matrix storage and operations on hetnets☆15Updated 2 years ago
- tools for assessment and categorization of research software☆18Updated last year
- Automated search across multiple databases and preprint servers to save your time during structured literature search and review.☆14Updated last year
- AI agents + toolkits for scientific knowledge☆27Updated 8 months ago
- Batch scripts curating BioRxiv and PubMed articles by using Altmetric score.☆11Updated 5 years ago
- ☆11Updated 6 months ago
- Benchmark for LLM-based Agents in Computational Biology☆40Updated last month
- All the World's a (Hyper)Graph: A Data Drama (DSH 2023)☆15Updated 2 years ago
- Ensemble Integration: a customizable pipeline for generating multi-modal, heterogeneous ensembles☆20Updated 7 months ago
- A place for all knowledge regarding Research Data Management (RDM) in Chemistry☆11Updated last week
- Written in python, for checking reference lists in systematic reviews and literature reviews, helps with reference list searching both ba…☆23Updated 5 years ago
- Generate visualisations for systematic literature reviews☆13Updated last year
- A text mining tool for developing visual and interactive relationship networks from PubMed article information.☆14Updated 10 months ago
- Snakemake + Singularity + SLURM☆9Updated 3 years ago
- BioDWH2 is an easy-to-use, automated, graph-based data warehouse and mapping tool for bioinformatics and medical informatics.☆16Updated last week
- Derive ΔG for single residues from HDX-MS data☆28Updated last week
- The advanced implementation for BioChatter, using Next.js☆13Updated 4 months ago
- Tool for automated generation of computational workflows.☆17Updated 5 months ago
- This repository contains code for data preparation and experiments for pre training llm with repository level context in various ways☆11Updated last year