This Python script retrieves and analyzes scientific literature from PubMed related to specific genes, creates a word cloud visualization of key terms in the abstracts, and saves the results in a Word document. It utilizes the OpenAI GPT-3 model, BioPython's Entrez, and the mygene.info API for its operation.
☆11Nov 15, 2023Updated 2 years ago
Alternatives and similar repositories for PubMed_scraper_GPT
Users that are interested in PubMed_scraper_GPT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Rule-Based Thyroid Whole Slide Image Diagnosis☆10Aug 12, 2020Updated 5 years ago
- Use machine learning to find patterns of similar eligibility protocol criteria for clinical trials☆19Jan 9, 2019Updated 7 years ago
- Extended keyboard layers for easy navigation and functionality based on Colemak☆12Updated this week
- Projects using Adafruit's Circuit Python coding language☆19Jul 26, 2025Updated 8 months ago
- ☆19Feb 28, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆10Mar 24, 2025Updated last year
- Interactive shell for sqlite-utils using litecli☆14Jul 27, 2023Updated 2 years ago
- ☆26Feb 5, 2026Updated 2 months ago
- Interactive tutorials and documentation for file based Python interface.☆12Mar 21, 2025Updated last year
- ☆10Apr 21, 2024Updated last year
- The project hosts the data, methods and tools about Computer-Assisted Coding of ICD-11 in medical coding scenes.☆18Mar 13, 2020Updated 6 years ago
- Create your assistant in the OpenAI dashboard, generate an API key, and use this code to integrate it into Open WebUI. Remember that it i…☆15Jan 20, 2025Updated last year
- ☆14Mar 15, 2019Updated 7 years ago
- peak detection code for gas chromatography data☆18Apr 9, 2019Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- The implement of "COTSAE: CO-Training of Structure and Attribute Embeddings for Entity Alignment"☆14Nov 18, 2019Updated 6 years ago
- a split keyboard equipped with joy-con joystick, rotray encoder ec-11 and mouse wheel.☆20Apr 14, 2024Updated 2 years ago
- High-performance tool for negation and uncertainty detection in radiology reports☆16May 3, 2024Updated last year
- Using Biopython's Bio.Entrez package to Access NCBI Entrez databases☆16Jun 26, 2014Updated 11 years ago
- Convert Akta results from Unicorn 7 into a nicely formatted plot☆18Mar 7, 2023Updated 3 years ago
- Plugin for LLM adding a Markov chain generating model☆20Jul 3, 2024Updated last year
- Use open-webui via its api from the commandline instead of a browser☆18Dec 6, 2025Updated 4 months ago
- Extract your blinkist hightlights and library books☆14Aug 17, 2019Updated 6 years ago
- Scrape.md is a Python package that allows you to scrape text from any website and generate a comprehensive summary of the text using Ope…☆14Nov 24, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Training materials of the CADET-Workshop for tutorials and self-study.☆23Mar 30, 2026Updated 2 weeks ago
- MIMIC preprocessing for the ICML paper "Dynamic Measurement Scheduling for Event Forecasting Using Deep RL"☆19May 16, 2019Updated 6 years ago
- Obsidian plugin to import notes from a Tolino E-Reader☆11Jul 18, 2024Updated last year
- A complete Python text analytics package that allows users to search for a Wikipedia article, scrape it, conduct basic text analytics and…☆21Dec 8, 2022Updated 3 years ago
- Template repository for automatic extensions publishing☆22Oct 25, 2022Updated 3 years ago
- A Rust wrapper around the Entrez API. Helps you access the Entrez API using idiomatic Rust. It also provides tools to parse the XML resul…☆20Dec 8, 2022Updated 3 years ago
- Use gpt to summarize abstracts for a pubmed query☆40Mar 26, 2023Updated 3 years ago
- Some guides for hacking Tolino ebook readers☆17Jun 10, 2022Updated 3 years ago
- Datasette plugin for uploading CSV files and converting them to database tables☆26Nov 10, 2025Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-firs…☆29May 1, 2016Updated 9 years ago
- Datasette plugin for rendering Markdown☆31Aug 15, 2023Updated 2 years ago
- Enable RNNLM lattice rescoring with Pytorch [kaldi]☆12Jun 5, 2020Updated 5 years ago
- A step-by-step guide for surrogate optimization using Gaussian Process surrogate model☆32Dec 17, 2020Updated 5 years ago
- Automatically exported from code.google.com/p/transducersaurus☆11Apr 1, 2015Updated 11 years ago
- Automates the creation of JSON template files for Obsidian WebClipper.☆46Feb 19, 2025Updated last year
- ☆33Jan 23, 2026Updated 2 months ago