Open-source AI research assistant for biomedicine — chat to run RNA-seq, drug discovery, clinical analysis, and more. Built on Claude Code with 140 K-Dense scientific skills, real-time dashboard, and RStudio/JupyterLab integration. | 开源生物医学 AI 研究助手，对话即可驱动转录组、药物发现、临床分析等工作流，集成 140 个科学技能与实时研究看板。
☆912Mar 12, 2026Updated last week
Alternatives and similar repositories for MedgeClaw
Users that are interested in MedgeClaw are comparing it to the libraries listed below
Sorting:
- ☆30Feb 2, 2026Updated last month
- Interactive visulizations for track-based genomic data in R☆15Sep 9, 2024Updated last year
- [ICCV 2025] Can Generative Geospatial Diffusion Models Excel as Discriminative Geospatial Foundation Models?☆23Sep 16, 2025Updated 6 months ago
- ☆12Feb 10, 2023Updated 3 years ago
- 🦞 Your AI Personal Assistant. An intelligent assistant with memory, skills, and scheduled tasks that truly understands you . Helping yo…☆214Updated this week
- Generative Pretraining from Transcriptomes☆17Feb 6, 2023Updated 3 years ago
- NeurIPS 2022 paper, SubHypergraph Inductive Neural nEtwork☆19Aug 4, 2023Updated 2 years ago
- MCP server for academic paper search, curation, and multi-platform push☆48Mar 13, 2026Updated last week
- A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL.☆14Nov 29, 2013Updated 12 years ago
- StockRegister是基于FISCO BCOS区块链底层平台研发的股权登记系统，该系统提供了合约治理、账户管理、企业管理、股权管理四大类功能。合约治理主要功能包括创建企业信息合约、创建企业股权合约、创建账户、合约的状态及归属者管理等；账户管理主要功能包括内外部账户映射…☆11Aug 8, 2022Updated 3 years ago
- ☆29Apr 14, 2024Updated last year
- A JBrowse plugin for creating sashimi or junction style plots from RNA-seq data☆14Apr 30, 2021Updated 4 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆11Apr 20, 2023Updated 2 years ago
- Code sharing related to DREAM challenges☆24Feb 21, 2017Updated 9 years ago
- ☆11Jul 13, 2018Updated 7 years ago
- ASimulatoR: splice-aware RNA-seq data simulation https://doi.org/10.1093/bioinformatics/btab142☆11Sep 6, 2022Updated 3 years ago
- ☆11Jun 14, 2023Updated 2 years ago
- python module for querying the vicc knowledgebase integration datastore☆11Jul 6, 2023Updated 2 years ago
- eVITTA: an easy Visualization and Inference Toolbox for Transcriptome Analysis☆12Mar 23, 2024Updated last year
- Code to reproduce "Detecting liver cancer using cell-free DNA fragmentomes☆11Nov 18, 2022Updated 3 years ago
- Full-length linear and circular transcript isoform reconstruction and quantification☆11Jun 17, 2024Updated last year
- Pipeline for Nanopore sequencing: demultiplexing, variant calling, and quality visualization with error handling.☆11Jan 25, 2026Updated last month
- A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expr…☆10Jan 20, 2022Updated 4 years ago
- Freddie: Annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing☆16Nov 29, 2022Updated 3 years ago
- ☆27Feb 4, 2026Updated last month
- Unofficial Brickseek API for product inventory checking☆15Dec 8, 2022Updated 3 years ago
- Finding patch of conserved amino acid sites in 3D structure☆13Apr 13, 2025Updated 11 months ago
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆14Jan 21, 2018Updated 8 years ago
- R package MKmisc☆12Sep 10, 2025Updated 6 months ago
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆18Nov 18, 2025Updated 4 months ago
- a bucket of bioinformatics scripts☆13Mar 5, 2026Updated 2 weeks ago
- Multiscale embedded gene co-expression network analysis☆58Jan 9, 2024Updated 2 years ago
- Method to detect exonic CNVs in NGS Gene Targeted Panels☆16Dec 3, 2019Updated 6 years ago
- Analysis pipelines for cancer genome sequencing in mice.☆23Jul 29, 2024Updated last year
- Fragmentase Artifact Detection and Elimination☆12Mar 22, 2022Updated 3 years ago
- Resources and examples to learn how to use and make MCP servers for data and analytics.☆45Jul 8, 2025Updated 8 months ago
- A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data☆16Jun 17, 2020Updated 5 years ago
- Tutorial for STAR-Fusion, FusionInspector, and de novo reconstruction of fusion transcripts using Trinity☆14Nov 21, 2019Updated 6 years ago
- An introductory course to eQTL analysis.☆10Jul 11, 2025Updated 8 months ago