plumed / condaLinks
Repository with conda recipes for LAMMPS, GROMACS, etc (WIP)
☆11Updated last year
Alternatives and similar repositories for conda
Users that are interested in conda are comparing it to the libraries listed below
Sorting:
- Running a molecular simulation with the polarizable force field in LAMMPS☆20Updated 3 years ago
- Accelerating Metadynamics-Based Free-Energy Calculations with Adaptive Machine Learning Potentials☆17Updated 4 years ago
- This python code creates hybrid MD/MC (NAMD/GOMC) simulations for the NVT, NPT, GCMC, and GEMC-NVT ensembles☆46Updated 3 weeks ago
- Depiction of Potential Energy Surfaces☆18Updated 4 months ago
- Database of hand-built OPLS-AA parameters and topologies for 464 molecules. Zip files contains parameter and topologies for OpenMM, Groma…☆36Updated 7 years ago
- Code and examples to compute IR spectra from normal mode analysis☆15Updated 3 years ago
- ☆46Updated 5 years ago
- Python interface for Enhanced Monte Carlo (EMC)☆23Updated 2 weeks ago
- sTDA-xTB Hamiltonian for ground state☆23Updated 3 years ago
- A GUI program for plotting Minimal energy path on potential energy surface.☆41Updated 5 years ago
- ☆30Updated 3 years ago
- A package of tools for automating the file preparation for the LAMMPS fix bond/react.☆23Updated 3 years ago
- A force field for the simulation of inorganic-organic interfaces (INTERFACE-CHARMM, INTERFACE-PCFF)☆19Updated last year
- Machine learning exercises for the MolSim course (http://www.acmm.nl/molsim/molsim2023/index.html)☆28Updated 2 years ago
- Code to compute Onsager transport coefficients from molecular dynamics simulations using mean-square displacements.☆29Updated 4 years ago
- AutoTST: A framework to perform automated transition state theory calculations☆44Updated last month
- Molecular simulation toolkit☆19Updated 4 months ago
- ☆18Updated 3 years ago
- ☆25Updated 2 years ago
- ☆52Updated 3 years ago
- A TCL code for the calculation of mass/number density of a system.☆19Updated last year
- MLP training for molecular systems☆56Updated 3 weeks ago
- pywindow is a Python package for structural analysis of discrete molecules with voids and windows, individually, in molecular systems and…☆13Updated 4 months ago
- Charge equilibration method for crystal structures☆17Updated 3 years ago
- Python-based tool to calculate instantaneous interfaces and concentration/orientation profiles from molecular simulation trajectories in …☆12Updated 6 years ago
- A package for Covalent Organic Frameworks structure assembly based on specific building block, topology and functional groups based on th…☆61Updated 4 months ago
- ☆28Updated 3 years ago
- zeo++ fork of the LSMO☆23Updated 3 years ago
- Deep Modeling for Molecular Simulation, two-day virtual workshop, July 7-8, 2022☆53Updated 3 years ago
- Convert PDB files to LAMMPS data and force field files.☆19Updated 8 years ago