☆60May 8, 2022Updated 4 years ago
Alternatives and similar repositories for preql
Users that are interested in preql are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Automation is a library for building workflows in a declarative way.☆15Nov 3, 2025Updated 6 months ago
- pysh-db - The Data Science Toolkit (DSK)☆13Dec 5, 2018Updated 7 years ago
- Provides classes for working with sets☆11Dec 19, 2025Updated 5 months ago
- ☆13Nov 15, 2017Updated 8 years ago
- Genomic Visualization Catalog☆13Oct 6, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Pan gGnome Viewer☆10Jul 10, 2025Updated 10 months ago
- Pipeline for generating RNAseq-based cancer patient reports☆12Updated this week
- ☆11Jul 13, 2018Updated 7 years ago
- Msuite2: integrated DNA methylation data analysis toolkit with enhanced performance☆10Jan 21, 2025Updated last year
- ☆13Jan 23, 2020Updated 6 years ago
- Non-parametric structural variant genotyper☆15Nov 18, 2021Updated 4 years ago
- polygenic scores using variational inference on GWAS summary statistics from multiple cohorts☆11Dec 7, 2022Updated 3 years ago
- Algorithm to implement Fraction and Allelic Copy number Estimate from Tumor/normal Sequencing using unmatched normal sample(s) for log ra…☆13Sep 15, 2023Updated 2 years ago
- multi_tbx: a simple tool for indexing VCF files and extract variant records for variant data stored in multiple VCF files.☆10Jan 7, 2022Updated 4 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Package generating elasticsearch mapping from jsonschemas☆14Jul 31, 2019Updated 6 years ago
- Variant to disease dataset workflows for Open Targets Genetics☆13May 11, 2026Updated 2 weeks ago
- heatmap3 is an improved heatmap package. It is completely compatible with the original R function heatmap, and provides some more powerfu…☆10Sep 2, 2021Updated 4 years ago
- Simple R script for plotting ideograms and annotating with bed files.☆12Sep 21, 2015Updated 10 years ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- A computational method for comparing cellular profiles with the flexibility to place a higher weight on functional features of interest.☆12Jan 31, 2023Updated 3 years ago
- Hemang Parikh☆11Jan 12, 2016Updated 10 years ago
- SEEKIN: SEquence-based Estimation of KINship☆14Oct 11, 2017Updated 8 years ago
- Python package for cancer early detection based on a model of cancer evolution and circulating tumor DNA (ctDNA) shedding☆13Jan 8, 2021Updated 5 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- A tool for sample swap identification in high throughput sequencing studies☆10Mar 4, 2025Updated last year
- Detects human contamination in bam files☆16Sep 10, 2020Updated 5 years ago
- Library and tool for annotating MAF files using Genome Nexus Webserver API☆13Updated this week
- ☆12Apr 16, 2026Updated last month
- ASCETIC (Agony-baSed Cancer EvoluTion InferenCe) is a novel framework for the inference of a set of statistically significant temporal pa…☆12Apr 18, 2025Updated last year
- Automated CWL and Galaxy XML generation for Python tools that use argparse and click☆11Jul 29, 2019Updated 6 years ago
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆14Aug 17, 2021Updated 4 years ago
- Companion repository for the human variant calling pipeline comparison paper☆12Feb 21, 2022Updated 4 years ago
- PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.☆17Dec 28, 2022Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Issue tracker for the Open Targets Platform☆13Jul 8, 2025Updated 10 months ago
- Perform Cloud Data Science with Azure Machine Learning☆12Jul 2, 2018Updated 7 years ago
- Detection of structural variants in cancer mate-pair and paired-end data☆13May 3, 2019Updated 7 years ago
- R package for CRAG☆12Feb 17, 2025Updated last year
- ☆11Jun 26, 2020Updated 5 years ago
- Roslin is a reproducible and reusable workflow for Cancer Genomic Sequencing Analysis☆16Nov 13, 2024Updated last year
- CAGE-sequencing analysis pipeline with trimming, alignment and counting of CAGE tags.☆11Updated this week