Alternatives and similar repositories for TMBtools:

Users that are interested in TMBtools are comparing it to the libraries listed below

• kaskr / tmbstan
  ☆30Updated 3 months ago
• pfmc-assessments / geostatistical_delta-GLMM
  Tool for geostatistical analysis of survey data, for use when estimating an index of abundance
  ☆20Updated last year
• Cole-Monnahan-NOAA / adnuts
  An R package for NUTS sampling using ADMB
  ☆24Updated 2 weeks ago
• skaug / tmb-case-studies
  Worked examples in TMB (Template Model Builder)
  ☆34Updated 6 months ago
• James-Thorson / 2018_FSH556
  Class materials for FSH556: Spatio-temporal models for ecologists in spring 2018 at UW
  ☆46Updated last year
• timcdlucas / INLAutils
  R package providing utilities for INLA
  ☆30Updated 2 years ago
• mebrooks / selfisher
  selfisher - modeling the SELectivity of FISHERies gear in R
  ☆10Updated last year
• kaskr / TMB_contrib_R
  ☆10Updated 3 years ago
• ElliotDovers / scampr
  Spatially Correlated, Approximate Modelling of Point patterns in R
  ☆16Updated last year
• kaskr / RTMB
  R bindings to TMB
  ☆56Updated this week
• timjmiller / wham
  State-space, age-structured fish stock assessment model
  ☆35Updated this week
• nimble-dev / AHMnimble
  Examples from Kéry & Royle's "Applied Hierarchical Modeling in Ecology (Volume I)" converted to NIMBLE
  ☆26Updated 6 years ago
• fishfollower / SAM
  Git page for SAM R-package
  ☆49Updated this week
• biodiverse / spAbundance
  Univariate and Multivariate Spatial Modeling of Species Abundance
  ☆17Updated last month
• mikemeredith / IPMbook
  R package with functions and data for the book 'Integrated Population Modeling'
  ☆12Updated 2 years ago
• steps-dev / steps
  steps: Spatially- and Temporally- Explicit Population Simulator
  ☆18Updated last year
• spacetime-ecologist / spacetime-ecologists-RTMB
  ☆10Updated 4 months ago
• nimble-dev / nimbleEcology
  ☆18Updated 2 weeks ago
• casperwberg / surveyIndex
  R package for calculating survey indices by age from DATRAS exchange data
  ☆13Updated 7 months ago
• aammd / ISEC_stan_course
  A 6 hour course on Stan with Dan Simpson, Vianey Leos-Barajas, and Andrew MacDonald
  ☆20Updated 4 years ago
• AdrianHordyk / LBSPR
  Length Based Spawning Potential Ratio R Package
  ☆8Updated last year
• objornstad / ecomodelmarkdowns
  Stand alone markdowns with embedded shiny apps for various eco&epi models
  ☆24Updated last year
• jlaake / RMark
  R package for interface to MARK for mark-recapture data analysis
  ☆20Updated 2 months ago
• EmilyMarkowitz-NOAA / NMFSReports
  Write smart R Markdown reports with these basic and easy functions!
  ☆18Updated 2 years ago
• julianfaraway / brinla
  Bayesian Regression with INLA
  ☆49Updated 2 years ago
• wfithian / multispeciesPP
  Poisson process models for multispecies presence-absence and presence-only data
  ☆13Updated 10 years ago
• bbsBayes / bbsBayes
  An R Package for Hierarchical Bayesian Analysis of North American Breeding Bird Survey Data
  ☆35Updated 8 months ago
• TMB-ADMB-Workshops / Feb2016
  UW (Seattle) 8-12 Feb 2016. Introductory and spatial modelling in TMB. Instructors: Arni Magnusson and Jim Thorson
  ☆12Updated 8 years ago
• jmlondon / pathroutr
  R package for routing tracks around barrier polygons
  ☆17Updated last year
• inlabru-org / fmesher
  Standalone package for mesh/SPDE/GMRF code from the INLA package
  ☆16Updated this week