Multiscale Atlas of Gene expression for Integrative Cortical Cartography
☆15Feb 8, 2024Updated 2 years ago
Alternatives and similar repositories for MAGICC
Users that are interested in MAGICC are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- developmental cortical propagation detection + analyses☆10Jan 16, 2023Updated 3 years ago
- Exploring intrinsic gradients of the AHBA☆16Jan 23, 2025Updated last year
- Code supporting Bazinet et al., 2023, "Assortative mixing in micro-architecturally annotated brain connectomes" (Nature Communications)☆14May 19, 2023Updated 3 years ago
- A toolbox for brain network modeling on GPUs☆23Jul 1, 2026Updated 3 weeks ago
- brainPlot is a MATLAB function to create simple line-art brain plots.☆108Sep 9, 2021Updated 4 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A Python implementation of the brain connectivity toolbox. **Not actively maintained.**☆38Feb 11, 2022Updated 4 years ago
- Quantifying and describing blood-oxygen-level dependent (BOLD) spatial propagation activity☆30Sep 6, 2023Updated 2 years ago
- Data and code supporting Hansen et al., 2023 PLOS Biology "Integrating multimodal and multiscale connectivity blueprints of the human cer…☆36Jul 22, 2025Updated last year
- A toolbox for custom data visualization in the subcortex and cerebellum☆63Jul 20, 2026Updated last week
- Scripts to extract features of cortical folding from MRI☆13Mar 10, 2025Updated last year
- matplotlib mesh surface plotter☆30Jul 25, 2025Updated last year
- Analysis functions for surface-based analyses, using freesurfer and connectome workbench☆16Apr 19, 2024Updated 2 years ago
- A short course on network data science at Johns Hopkins University☆21Nov 3, 2023Updated 2 years ago
- ☆27Jun 26, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A toolbox for ensemble-based multimodal gene-category enrichment analysis of human neuroimaging data. DEPRICATED! Succeeded by "NiSpace"☆20May 30, 2025Updated last year
- BigBrainWarp☆28Jun 13, 2025Updated last year
- A curated list of awesome network analysis resources.☆13Jun 24, 2018Updated 8 years ago
- Useful tools from the Network Neuroscience Lab☆121Jun 10, 2026Updated last month
- ☆28Dec 26, 2023Updated 2 years ago
- Toolbox for performing gene set enrichment analysis in Matlab (including ensemble enrichment)☆17Nov 5, 2023Updated 2 years ago
- Closed-loop feedback optogenetic system☆10Apr 5, 2022Updated 4 years ago
- ☆57Oct 26, 2025Updated 9 months ago
- Hopefully, a compact and general-purpose Python package for Multiperturbation Shapley value Analysis (MSA).☆20Jul 14, 2025Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- agent-based S-I-R model for neurodegeneration☆21Mar 1, 2022Updated 4 years ago
- ☆16Nov 16, 2015Updated 10 years ago
- Initial recommendations for performing, benchmarking, and reporting single-cell proteomics experiments. The code is distributed under an …☆12Apr 5, 2023Updated 3 years ago
- The Brain Activity Flow ("Actflow") Toolbox. Tools to quantify the relationship between connectivity and task activity through network si…☆48Mar 17, 2025Updated last year
- Visualization in Python: an overview☆17Jul 31, 2018Updated 7 years ago
- The Brain Dynamics Toolbox☆36Sep 5, 2020Updated 5 years ago
- Compare a statistical map of a brain with gene expression patterns from Allen Human Brain Atlas.☆33Sep 7, 2018Updated 7 years ago
- A package for publication-ready brain surface figures☆76Nov 18, 2025Updated 8 months ago
- Integrative Analyses across 388 human brain samples at single-cell resolution☆19Mar 21, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code to reproduce analyses of mouse cortical gradients☆10Feb 27, 2019Updated 7 years ago
- ☆109Jul 23, 2017Updated 9 years ago
- Code for projecting volumetric nifti files to HCP surface and Glasser atlas parcel-wise value extraction☆13May 21, 2023Updated 3 years ago
- ☆21Apr 22, 2024Updated 2 years ago
- Data and code supporting Hansen et al., 2022 Nature Neuroscience "Mapping neurotransmitter systems to the structural and functional organ…☆128Oct 27, 2022Updated 3 years ago
- 湾区日报备份（2014/08/06 - 2021/08/09）☆10Feb 4, 2023Updated 3 years ago
- Standard human cortical surface-based template for neuroimaging analyses (Freesurfer, left-right-symmetric, ~32k vertices) v☆55Sep 26, 2023Updated 2 years ago