Alternatives and similar repositories for first-edition:

Users that are interested in first-edition are comparing it to the libraries listed below

• nimble-dev / nimbleEcology
  ☆18Updated last month
• AdamCSmithCWS / Smith_Edwards_GAM_BBS
  Full code and models for paper describing a hierarchical Bayesian GAM for the BBS
  ☆12Updated 4 years ago
• aammd / ISEC_stan_course
  A 6 hour course on Stan with Dan Simpson, Vianey Leos-Barajas, and Andrew MacDonald
  ☆20Updated 4 years ago
• ElliotDovers / scampr
  Spatially Correlated, Approximate Modelling of Point patterns in R
  ☆15Updated 11 months ago
• biodiverse / spAbundance
  Univariate and Multivariate Spatial Modeling of Species Abundance
  ☆17Updated 3 months ago
• boettiger-lab / pomdp-intro
  A separate repo for first pomdp paper (AmNat)
  ☆17Updated 3 years ago
• mikemeredith / IPMbook
  R package with functions and data for the book 'Integrated Population Modeling'
  ☆12Updated 2 years ago
• itchyshin / orchard_plot
  Introducing the Orchard Plot for Meta-analysis
  ☆16Updated 2 years ago
• nimble-dev / AHMnimble
  Examples from Kéry & Royle's "Applied Hierarchical Modeling in Ecology (Volume I)" converted to NIMBLE
  ☆26Updated 6 years ago
• Pakillo / writing-reproducible-manuscripts
  Talk on writing reproducible manuscripts
  ☆15Updated 4 years ago
• MarieAugerMethe / DFO_HMM_2022
  Workshop on hidden Markov models for DFO 2022
  ☆17Updated 2 years ago
• steps-dev / steps
  steps: Spatially- and Temporally- Explicit Population Simulator
  ☆18Updated last year
• OARS-SAFS / resources
  Open and Reproducible Science Resources
  ☆17Updated 5 years ago
• BlasBenito / distantia
  R package to compute dissimilarity between multivariate time series
  ☆23Updated this week
• objornstad / ecomodelmarkdowns
  Stand alone markdowns with embedded shiny apps for various eco&epi models
  ☆25Updated last year
• trashbirdecology / bbsAssistant
  An R package for downloading and handling data and information from the North American Breeding Bird Survey.
  ☆29Updated last year
• r-glennie / occuR
  Occupancy modelling with generalized additive models in Template Model Builder.
  ☆12Updated 2 years ago
• jmlondon / ptolemy
  R package for easy access to the global high-resolution geography dataset
  ☆14Updated 3 years ago
• RushingLab / WILD6900
  Course materials for WILD6900: Applied Bayesian Analysis for Ecological Data
  ☆14Updated last year
• TheoreticalEcology / ecodata
  A collection of ecological datasets for teaching
  ☆11Updated last year
• pfmc-assessments / geostatistical_delta-GLMM
  Tool for geostatistical analysis of survey data, for use when estimating an index of abundance
  ☆20Updated last year
• TheoreticalEcology / machinelearning
  Teaching Material for a Machine Learning course with Keras and Tensorflow in R
  ☆17Updated 7 months ago
• bbsBayes / bbsBayes
  An R Package for Hierarchical Bayesian Analysis of North American Breeding Bird Survey Data
  ☆35Updated 6 months ago
• EcologicalTraitData / traitdataform
  A package to manage and compile functional trait data into predefined templates
  ☆33Updated 2 years ago
• goldingn / GRaF
  Species distribution modelling using Gaussian random fields
  ☆14Updated 7 years ago
• SwampThingPaul / EcoDataViz
  My attempt at participating in some mutant form of Tidy Tuesday.
  ☆12Updated 5 years ago
• n-a-gilbert / AHM_NIMBLE
  Code from Applied Hierarchical Modeling in Ecology translated to NIMBLE (from JAGS/WinBUGS)
  ☆13Updated 2 years ago
• kenkellner / jagsUI
  R package to Run JAGS (Just Another Gibbs Sampler) analyses from within R
  ☆34Updated this week
• bbolker / discretization
  opinion piece on discretization and multimodel averaging in ecological statistics
  ☆26Updated 8 months ago
• ecohealthalliance / container-template
  Containerised R workflow template
  ☆23Updated last year