fk128 / sarcopenia-ai
Code for paper Kanavati, F. et al. (2020). Fully-automated deep learning slice-based muscle estimation from CT images for sarcopenia assessment. arXiv preprint arXiv:2006.06432.
β29Updated last year
Related projects β
Alternatives and complementary repositories for sarcopenia-ai
- Hand-crafted radiomics and deep learning-based radiomcis features extraction.β78Updated 2 years ago
- π₯ Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning modelβ65Updated last month
- Pytorch implementation of the paper Iterative fully convolutional neural networks for automatic vertebra segmentation accepted in MIDL201β¦β61Updated last year
- Deep-learning Radiomics for Classification Modellingβ71Updated 2 years ago
- 3D-Unet: patched based Pytorch implementation for medical images segmentationβ62Updated 3 years ago
- β75Updated last year
- Hierarchical probabilistic 3D U-Net, with attention mechanisms (βππ΅π΅π¦π―π΅πͺπ°π― π-ππ¦π΅, ππππ¦π΄ππ¦π΅) and a nested decoder strβ¦β39Updated 2 years ago
- We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D Uβ¦β108Updated 4 years ago
- β38Updated last year
- use pytorch to implement 3d unet for lits dataset to segmentationβ58Updated 5 years ago
- repository for autoPET machine lerning challengeβ61Updated 3 months ago
- A 3D U-Net Based Solution to BraTS 2019 in Kerasβ49Updated 4 years ago
- Use of state of the art Convolutional neural network architectures including 3D UNet, 3D VNet and 2D UNets for Brain Tumor Segmentation aβ¦β164Updated 4 years ago
- DICOM RT-Struct to maskβ93Updated 8 months ago
- This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.β71Updated last month
- Segmentation deep learning ALgorithm based on MONai toolbox: single and multi-label segmentation software developed by QIMP team-Vienna.β120Updated 3 years ago
- Multimodal Brain mpMRI segmentation on BraTS 2023 and BraTS 2021 datasets.β56Updated this week
- Workflow for Optimal Radiomics Classificationβ69Updated 4 months ago
- Medical Image Radiomics Processorβ53Updated 2 months ago
- Variant VNet familyβ82Updated 3 years ago
- β23Updated 3 years ago
- Annotations for the PI-CAI Challenge: Public Training and Development Datasetβ49Updated 2 months ago
- Robust Chest CT Image Segmentation of COVID-19 Lung Infection based on limited dataβ90Updated last year
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.β77Updated 2 years ago
- Visualization for radiomics feature generated by pyradiomicsβ46Updated 2 years ago
- β21Updated last year
- TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.β24Updated 9 months ago
- Clinically-Interpretable Radiomics [MICCAI'22, CMPB'21]β28Updated last year
- Automatic image (2D) and volume (3D) binary semantic segmentation of pancreas computed tomography (CT) using UNet architecture.β42Updated 3 years ago
- LUNA(LUng Nodule Analysis) 2016 Segmentation Pipelineβ47Updated last year