Python library for analysis of time series data including dimensionality reduction, clustering, and Markov model estimation
☆859Mar 30, 2026Updated last month
Alternatives and similar repositories for deeptime
Users that are interested in deeptime are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 🚂 Python API for Emma's Markov Model Algorithms 🚂☆339Sep 11, 2023Updated 2 years ago
- Python Dynamic Mode Decomposition☆1,226Dec 19, 2025Updated 5 months ago
- How to analyze molecular dynamics data with PyEMMA☆86May 29, 2019Updated 6 years ago
- Deep learning meets molecular dynamics.☆189May 3, 2019Updated 7 years ago
- A package for computing data-driven approximations to the Koopman operator.☆428Jan 22, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A package for the sparse identification of nonlinear dynamical systems from data☆1,835Mar 24, 2026Updated 2 months ago
- ☆18Oct 19, 2020Updated 5 years ago
- ☆10Mar 31, 2023Updated 3 years ago
- Helper function for Markov State Models☆11Jun 25, 2024Updated last year
- Extending state-of-the-art Time Series Forecasting with Subsequence Time Series (STS) Clustering to enforce model seasonality adaptation.☆20Oct 19, 2022Updated 3 years ago
- PySINDy GUI☆47Apr 15, 2023Updated 3 years ago
- The machine learning toolkit for time series analysis in Python☆3,151Updated this week
- Boltzmann Generators and Normalizing Flows in PyTorch☆197Jan 30, 2024Updated 2 years ago
- Get access to our MD data files.☆33Nov 22, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A unified framework for machine learning with time series☆9,772Updated this week
- Winter is coming...☆14Jan 23, 2019Updated 7 years ago
- An open library for the analysis of molecular dynamics trajectories☆716May 4, 2026Updated 3 weeks ago
- pyGPCCA - python GPCCA: Generalized Perron Cluster Cluster Analysis package to coarse-grain reversible and non-reversible Markov state mo…☆28Feb 17, 2026Updated 3 months ago
- Differentiable, Hardware Accelerated, Molecular Dynamics☆1,417Updated this week
- ☆383Oct 15, 2021Updated 4 years ago
- Linear and non-linear spectral forecasting algorithms☆139Feb 12, 2021Updated 5 years ago
- ☆25Feb 28, 2023Updated 3 years ago
- Modeling molecular ensembles with scalable data structures and parallel computing☆37Mar 11, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Time series Timeseries Deep Learning Machine Learning Python Pytorch fastai | State-of-the-art Deep Learning library for Time Series an…☆6,063May 13, 2026Updated last week
- A Python package for time series classification☆1,873Jun 18, 2025Updated 11 months ago
- Variational Autoencoder for Dimensionality Reduction of Time-Series☆189May 1, 2022Updated 4 years ago
- An open source Python framework for transition interface and path sampling calculations.☆116May 11, 2026Updated 2 weeks ago
- Tutorials of few enhanced sampling methods along with bash script to run the method in a single shot..☆48Feb 11, 2021Updated 5 years ago
- A python framework to run adaptive Markov state model (MSM) simulation on HPC resources☆17Aug 1, 2025Updated 9 months ago
- PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.☆149Feb 12, 2025Updated last year
- ☆15Apr 7, 2022Updated 4 years ago
- Development version of plumed 2☆498May 13, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆29Jun 7, 2018Updated 7 years ago
- Basis sets, estimators and solvers for the variational approach of conformation dynamics. NOTE: the code has been merged with PyEMMA and …☆10Dec 8, 2016Updated 9 years ago
- PyTorch code for Learning Deep Time-index Models for Time Series Forecasting (ICML 2023)☆365May 1, 2025Updated last year
- ☆32Feb 24, 2022Updated 4 years ago
- neural networks to learn Koopman eigenfunctions☆481Mar 22, 2024Updated 2 years ago
- An intuitive library to extract features from time series.☆1,092Jan 30, 2026Updated 3 months ago
- IPython API to visualize MD-trajectories along projected trajectories inside a Jupyter notebook☆44Feb 14, 2019Updated 7 years ago