Python library for analysis of time series data including dimensionality reduction, clustering, and Markov model estimation
☆882Jun 26, 2026Updated last month
Alternatives and similar repositories for deeptime
Users that are interested in deeptime are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 🚂 Python API for Emma's Markov Model Algorithms 🚂☆340Sep 11, 2023Updated 2 years ago
- Python Dynamic Mode Decomposition☆1,247Dec 19, 2025Updated 7 months ago
- How to analyze molecular dynamics data with PyEMMA☆88May 29, 2019Updated 7 years ago
- Deep learning meets molecular dynamics.☆189May 3, 2019Updated 7 years ago
- A package for computing data-driven approximations to the Koopman operator.☆446Jan 22, 2026Updated 6 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A package for the sparse identification of nonlinear dynamical systems from data☆1,887Jun 10, 2026Updated 2 months ago
- Extending state-of-the-art Time Series Forecasting with Subsequence Time Series (STS) Clustering to enforce model seasonality adaptation.☆19Oct 19, 2022Updated 3 years ago
- ☆19Oct 19, 2020Updated 5 years ago
- ☆10Mar 31, 2023Updated 3 years ago
- Helper function for Markov State Models☆11Jun 25, 2024Updated 2 years ago
- PySINDy GUI☆48Apr 15, 2023Updated 3 years ago
- The machine learning toolkit for time series analysis in Python☆3,168Updated this week
- Boltzmann Generators and Normalizing Flows in PyTorch☆201Jan 30, 2024Updated 2 years ago
- Get access to our MD data files.☆34Nov 22, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A unified framework for machine learning with time series☆9,918Updated this week
- Winter is coming...☆14Jan 23, 2019Updated 7 years ago
- An open library for the analysis of molecular dynamics trajectories☆727Updated this week
- ☆390Oct 15, 2021Updated 4 years ago
- pyGPCCA - python GPCCA: Generalized Perron Cluster Cluster Analysis package to coarse-grain reversible and non-reversible Markov state mo…☆29Feb 17, 2026Updated 5 months ago
- Differentiable, Hardware Accelerated, Molecular Dynamics☆1,451Jul 26, 2026Updated 2 weeks ago
- Linear and non-linear spectral forecasting algorithms☆138Feb 12, 2021Updated 5 years ago
- Modeling molecular ensembles with scalable data structures and parallel computing☆37Mar 11, 2026Updated 5 months ago
- An open source Python framework for transition interface and path sampling calculations.☆117Jun 6, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆25Feb 28, 2023Updated 3 years ago
- Time series Timeseries Deep Learning Machine Learning Python Pytorch fastai | State-of-the-art Deep Learning library for Time Series an…☆6,104Jul 23, 2026Updated 3 weeks ago
- A Python package for time series classification☆1,876Jun 18, 2025Updated last year
- Variational Autoencoder for Dimensionality Reduction of Time-Series☆189May 1, 2022Updated 4 years ago
- Basis sets, estimators and solvers for the variational approach of conformation dynamics. NOTE: the code has been merged with PyEMMA and …☆10Dec 8, 2016Updated 9 years ago
- Tutorials of few enhanced sampling methods along with bash script to run the method in a single shot..☆49Feb 11, 2021Updated 5 years ago
- A python framework to run adaptive Markov state model (MSM) simulation on HPC resources☆17Aug 1, 2025Updated last year
- PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.☆153Feb 12, 2025Updated last year
- ☆15Apr 7, 2022Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Development version of plumed 2☆510Updated this week
- neural networks to learn Koopman eigenfunctions☆491Mar 22, 2024Updated 2 years ago
- ☆29Jun 7, 2018Updated 8 years ago
- PyTorch code for Learning Deep Time-index Models for Time Series Forecasting (ICML 2023)☆365May 1, 2025Updated last year
- An intuitive library to extract features from time series.☆1,098Jan 30, 2026Updated 6 months ago
- Statistical models for biomolecular dynamics☆44May 8, 2025Updated last year
- catch22: CAnonical Time-series CHaracteristics☆493Updated this week