Source code and demos for "Rapid identification of pathogenic bacteria using Raman spectroscopy and deep learning"
☆115Nov 5, 2019Updated 6 years ago
Alternatives and similar repositories for bacteria-ID
Users that are interested in bacteria-ID are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14Dec 1, 2022Updated 3 years ago
- We apply deep learning approaches to accurately identify 30 common bacterial pathogens, achieving an average isolate-level accuracy of ov…☆13Feb 27, 2021Updated 5 years ago
- Deep-Learning-Based Components Identification for Raman Spectroscopy☆52Jan 3, 2020Updated 6 years ago
- Official implementation for paper "Raman spectra matching with contrastive representation learning"☆19Nov 22, 2022Updated 3 years ago
- DeepeR: deep learning enabled Raman spectroscopy☆107Dec 11, 2023Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Framework for Raman spectroscopy analysis☆18May 19, 2024Updated 2 years ago
- RamanNet: A generalized neural network architecture for Raman Spectrum Analysis☆28May 29, 2023Updated 3 years ago
- A Universal and Accurate Method for Easily Component identification in Raman Spectroscopy Based on Deep Learning☆36Nov 2, 2025Updated 7 months ago
- Noise learning for Raman microscopy☆14Dec 15, 2023Updated 2 years ago
- Patch-based Convlutional Encoder for vibrational spectrum recognition☆14Sep 27, 2024Updated last year
- Scripts and data for "Transfer Learning Based Raman Spectra Identification"☆24Dec 24, 2019Updated 6 years ago
- Code for deep learning models to predict molecular electronic properties.☆16Jan 19, 2024Updated 2 years ago
- Deep Convolutional Neural Networks for Raman Spectrum Recognition. (RRUFF dataset)☆37Aug 18, 2020Updated 5 years ago
- RamanSPy: An open-source Python package for integrative Raman spectroscopy data analysis☆183Nov 9, 2025Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Generator useful to handle Raman spectra data augmentation for deep learning models☆29Aug 21, 2023Updated 2 years ago
- ☆15Jun 23, 2024Updated last year
- Deep CNN for Raman Applications☆52Mar 14, 2018Updated 8 years ago
- Source code of the paper "Prediction of Molecular Absorption Wavelength Using Deep Neural Networks"☆10May 29, 2022Updated 4 years ago
- Transformer in Chemical Language Model sometimes misunderstands chirality☆13Apr 19, 2024Updated 2 years ago
- Data and codes for 1D_CNN_For_Mineral_Classification☆20Jul 13, 2021Updated 4 years ago
- Image invert : 'Understanding Deep Image Representations by Inverting Them'☆14Jan 22, 2018Updated 8 years ago
- Brent's code for FTIR deconvolution☆12Dec 17, 2020Updated 5 years ago
- Machine learning software for rapid analysis of scientific spectra.☆57Feb 2, 2026Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- W-Net: A Deep Model for Fully Unsupervised Image Segmentation☆17Aug 5, 2018Updated 7 years ago
- Implementation of the Data-Driven SIMCA method for MATLAB☆10Mar 30, 2021Updated 5 years ago
- we collected Gram-stained bacteria images from lower respiratory tract specimens of patients with lung infections in Chinese PLA General…☆12Jan 18, 2024Updated 2 years ago
- Implementation of PLS-DA and OPLS-DA for high dimensional data, like MS in metabolomics.☆37Jun 30, 2025Updated 11 months ago
- PyTorch implementation of deep learning for Raman spectrum recognition: CNN, LSTM, Transformer, GNN and contrastive learning☆64Feb 13, 2025Updated last year
- The purpose of this repository is to use Transfer Learning in order to classify patients affected by Amyotrophic Lateral Sclerosis using …☆13Mar 10, 2021Updated 5 years ago
- This jupyter notebook is part of the lecture "Data Science for Raman spectroscopy" imparted by Nicolás Coca-López during the Hands-on Wor…☆13Jan 15, 2023Updated 3 years ago
- spectrai: a deep learning framework for spectral data☆80Aug 23, 2023Updated 2 years ago
- A collection of links to free and proprietary curve fitting software.☆13Dec 8, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- baseline correction using adaptive iteratively reweighted Penalized Least Squares☆139Apr 27, 2025Updated last year
- A fast and efficient spectra standardization algorithm.☆11May 2, 2019Updated 7 years ago
- Spectroscopy with Deep Learning☆32May 20, 2018Updated 8 years ago
- A classification method for hyperspectral data based on convolutional neural networks (may be applicable to other spectra such as Raman s…☆13Jul 10, 2021Updated 4 years ago
- Code for paper Extended Multiplicative Signal Augmentation: An alternative to pre-processing of infrared spectra☆15Jan 15, 2021Updated 5 years ago
- A convolutional neural network classifier for determining the oxidation state of Manganese☆23Jan 6, 2019Updated 7 years ago
- Deep-Learning-Based Multivariate Curve Resolution☆14Oct 14, 2021Updated 4 years ago