bioinfocao / pysapc
python package for Sparse Affinity Propagation (SAP) Clustering method
☆16Updated 4 years ago
Alternatives and similar repositories for pysapc:
Users that are interested in pysapc are comparing it to the libraries listed below
- Implementation of Trimmed Grassmann Average (TGA) by Hauberg S et al. in Python☆23Updated 9 years ago
- A scalable and concurrent programming implementation of Affinity Propagation clustering.☆25Updated 4 years ago
- Simulated Dual Annealing for python and benchmarks☆15Updated 5 years ago
- Bayesian hidden Markov models toolkit☆47Updated 4 years ago
- State space model + data pipeline to generate counterfactual time series trajectories on multiple clinical signals, used to evaluate the …☆7Updated 6 years ago
- Diffusion maps for python☆12Updated 4 years ago
- Compute set of important operations for HCTSA code☆26Updated 4 years ago
- Fast computation of diffusion maps and geometric harmonics in Python. Moved to https://git.sr.ht/~jmbr/diffusion-maps☆41Updated 3 years ago
- ugtm: a Python package for Generative Topographic Mapping☆49Updated 3 years ago
- A package for combining multiple partitions into a consolidated clustering. The combinatorial optimization problem of obtaining such a co…☆70Updated 2 years ago
- Relief Based Algorithms of ReBATE implemented in Python with Cython optimization. This repository is no longer being updated. Please see…☆33Updated 6 years ago
- This is a set of utilities and formats that illustrate how one could begin to perform operations on causal graphs and sample over these g…☆26Updated 9 years ago
- Bayesian Factorization with Side Information in C++ with Python wrapper☆41Updated 3 years ago
- Topological Features for Time Series Classification☆16Updated 4 years ago
- C++ Accelerated Python Diffusion Maps Library☆23Updated 6 years ago
- Modeling and Bayesian analysis of fluorescence and absorbance assays.☆18Updated 3 years ago
- Bayesian model averaging of an objective function over a model class using advanced MCMC techniques.☆16Updated 10 years ago
- Learn how to construct graphs given representative examples☆14Updated 3 years ago
- Implementation of Mapper Algorithm☆14Updated 8 years ago
- Functional matrix factorization via Bayesian tensor filtering☆13Updated last year
- Hierarchical Dirichlet Process (with Split-Merge Operations), originally by Chong Wang☆18Updated 11 years ago
- Integrative orthogonal non-negative matrix factorization☆31Updated 5 years ago
- NumPy-based constrained Dynamic Time Warping (cDTW) module☆12Updated 10 years ago
- Conformal Prediction library for Orange3☆10Updated 5 years ago
- PyMC3-like Interface for Pyro☆37Updated 5 years ago
- Time Series Motif Detection in Python☆20Updated 6 years ago
- scikit-learn gradient-boosting-model interactions☆25Updated last year
- A library for hypergraphs and hypergraph algorithms☆28Updated 9 years ago
- A novel approach to pose selection in protein-ligand docking based on graph theory.☆19Updated 8 years ago
- Deep Learning package for Python☆25Updated 6 years ago