bioinfocao / pysapc

Related projects ⓘ

Alternatives and complementary repositories for pysapc

• redst4r / pyDiffusionMaps
  Diffusion maps for python
  ☆12Updated 4 years ago
• GGiecold-zz / Cluster_Ensembles
  A package for combining multiple partitions into a consolidated clustering. The combinatorial optimization problem of obtaining such a co…
  ☆69Updated 2 years ago
• jmbr / diffusion-maps
  Fast computation of diffusion maps and geometric harmonics in Python. Moved to https://git.sr.ht/~jmbr/diffusion-maps
  ☆41Updated 3 years ago
• SamirMoustafa / Time-Series-Classification
  Topological Features for Time Series Classification
  ☆16Updated 4 years ago
• bhmm / bhmm
  Bayesian hidden Markov models toolkit
  ☆47Updated 4 years ago
• fabriziocosta / GraphLearn
  Learn how to construct graphs given representative examples
  ☆13Updated 3 years ago
• modusdatascience / glm-sklearn
  Some scikit-learn-esque wrappers for statsmodels GLM
  ☆23Updated 11 years ago
• chlubba / op_importance
  Compute set of important operations for HCTSA code
  ☆25Updated 4 years ago
• Sidcito / Financial_Crash_Landscape_Analysis_using_TDA
  Topological Data Analysis of a Financial Time Series for insights from Landscapes for detecting Financial Crashes
  ☆10Updated 6 years ago
• cavaunpeu / gaussian-processes
  A thorough, straightforward, un-intimidating introduction to Gaussian processes in NumPy.
  ☆16Updated 6 years ago
• lmcinnes / hypergraph
  A library for hypergraphs and hypergraph algorithms
  ☆28Updated 9 years ago
• jaak-s / macau
  Bayesian Factorization with Side Information in C++ with Python wrapper
  ☆41Updated 2 years ago
• NikolayOskolkov / HowUMAPWorks
  Here I explain the math behind UMAP and show how to program it from scratch in Python
  ☆38Updated 3 years ago
• LoLab-MSM / pyvipr
  Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML
  ☆27Updated last year
• sgubianpm / sdaopt
  Simulated Dual Annealing for python and benchmarks
  ☆15Updated 5 years ago
• acopar / fast-nmtf
  Fast methods for non-negative matrix tri-factorization
  ☆15Updated 5 years ago
• EESI / PyFeast
  A Python interface to the Feature Selection Toolkit, contains JMI, BetaGamma, CMIM, CondMI, DISR, ICAP, and mRMR
  ☆18Updated 10 years ago
• stylianos-kampakis / supervisedPCA-Python
  ☆38Updated 8 years ago
• willtownes / glmpca-py
  generalized principal component analysis (GLM-PCA) implemented in python
  ☆57Updated 3 years ago
• jg-you / dyvider
  Dynamic programming algorithms for exact linear clustering in networks.
  ☆16Updated last year
• choderalab / assaytools
  Modeling and Bayesian analysis of fluorescence and absorbance assays.
  ☆18Updated 3 years ago
• tansey / functionalmf
  Functional matrix factorization via Bayesian tensor filtering
  ☆13Updated last year
• mims-harvard / fusenet
  Network inference by fusing data from diverse distributions
  ☆14Updated 7 years ago
• quantumjot / PyFolding
  Python framework for multi-parameter optimization and evaluation of protein folding models
  ☆16Updated 3 years ago
• NikolayOskolkov / tSNE_vs_UMAP_GlobalStructure
  Here we address the global structure preservation by tSNE and UMAP
  ☆47Updated 4 years ago
• ThomasBrouwer / BNMTF
  Python code for "Fast Bayesian nonnegative matrix factorisation and tri-factorisation", presented at NIPS 2016 Workshop on Advances in Ap…
  ☆20Updated 6 years ago
• robince / pyentropy
  Information Theoretic Tools for Python
  ☆90Updated 5 years ago
• benfulcher / hctsa_python
  Initial attempt to incorporate some time-series analysis features from hctsa into python land
  ☆27Updated 8 years ago
• KrishnaswamyLab / graphtools
  Tools for building and manipulating graphs in Python
  ☆41Updated last year
• biolab / orange3-conformal
  Conformal Prediction library for Orange3
  ☆10Updated 5 years ago