arkhn-oss / pagaiLinks
Tools to suggest SQL columns for Pyrog
☆20Updated 4 years ago
Alternatives and similar repositories for pagai
Users that are interested in pagai are comparing it to the libraries listed below
Sorting:
- Populate FHIR-compliant objects using SQL databases and processing rules☆25Updated 5 years ago
- Serve FHIR standard in json, yml, etc.☆13Updated 6 years ago
- Standardization tool for healthcare data☆54Updated 3 years ago
- Live ETL pipeline to standardize Health Data into FHIR.☆41Updated 3 years ago
- Edit and create FHIR profiles with a shiny interface ✨☆15Updated 3 years ago
- FHIRPath implementation in Python.☆34Updated 2 years ago
- Query FHIR apis with SQL, for analytics and ML.☆25Updated 4 years ago
- ☆11Updated 3 years ago
- Main OMOPonFHIR Settings☆46Updated 3 years ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆61Updated 3 years ago
- Modular, fast NLP framework, compatible with Pytorch and spaCy, offering tailored support for French clinical notes.☆150Updated last week
- eds-scikit is a Python library providing tools to process and analyse OMOP data☆44Updated last year
- A Python FHIR specification parser and class generator☆181Updated last year
- Distributed, fault tolerant batch processing for Natural Language Applications and Search, using remote partitioning☆48Updated 3 years ago
- FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured informat…☆73Updated last month
- OMOP <-> FHIR mapper☆11Updated 2 years ago
- An open source automl library for using machine learning in healthcare.☆122Updated last year
- A web application to find patients, build cohorts and visualize health records☆54Updated this week
- FHIR to pandas dataframe for data analytics, AI and ML!☆44Updated 3 weeks ago
- Hephaestus - ETL and ML tools for OHDSI - OMOP CDM☆13Updated 4 months ago
- A3 - FHIR-native ETL+Q Prototype☆14Updated 5 years ago
- A Python library to de-identify medical records with state-of-the-art NLP methods.☆142Updated 2 months ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆85Updated 4 months ago
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.☆57Updated 3 weeks ago
- Generate code lists using an expressive combination of SNOMED ECL, ICD-10 and ATC codes☆15Updated last year
- Automatically exported from code.google.com/p/negex☆36Updated 3 years ago
- ☆29Updated 2 years ago
- Cohort extractor tool which can generate dummy data, or real data against OpenSAFELY-compliant research databases☆37Updated 6 months ago
- Running MedCAT as a RESTful web service☆22Updated 6 months ago
- ☆11Updated 4 years ago