Real time molecular dynamics in the browser using LAMMPS
☆73Apr 21, 2026Updated last week
Alternatives and similar repositories for atomify
Users that are interested in atomify are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Atomify - a realtime LAMMPS visualizer☆159Oct 19, 2022Updated 3 years ago
- A 22.9 million carbon atom dataset☆16Mar 7, 2023Updated 3 years ago
- Longbow is a tool for automating simulations on a remote HPC machine. Longbow is designed to mimic the normal way an application is run l…☆18Apr 13, 2026Updated 2 weeks ago
- Learning Molecular Dynamics with LAMMPS☆16Jan 15, 2024Updated 2 years ago
- Builder for molecular systems☆17Feb 3, 2026Updated 2 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- VSCODE extension for language support of LAMMPS scripts☆57Apr 8, 2026Updated 3 weeks ago
- This app is an ASE-base workflow used to reproduce a rational initial SEI morphology at the atomic scale by stochastically placing the cr…☆13Mar 16, 2026Updated last month
- Parallel Lammps Python interface - control a mpi4py parallel LAMMPS instance from a serial python process or a Jupyter notebook - based o…☆36Updated this week
- A simple workflow for minimum energy conformer search based on force field optimization methods (UFF and MMFF94) available from RDKit.☆13May 29, 2020Updated 5 years ago
- How-to perform LAMMPS simulations☆16Nov 27, 2023Updated 2 years ago
- Coarse-graining Hybrid and Inorganic Crystals (CHIC) is a Python package for automating the cleaning-up and coarse-graining of crystals a…☆14Nov 18, 2024Updated last year
- Tool to read a logfile produced by LAMMPS into a pandas dataframe with a get_log("log.lammps")-function providing the log data.☆70Jan 8, 2026Updated 3 months ago
- An interface between the Materials Project software suite and the Schrodinger Python API, designed to allow for high-throughput execution…☆13Apr 8, 2024Updated 2 years ago
- WhereWulff: A semi-autonomous workflow for systematic catalyst surface reactivity under reaction conditions☆33Apr 8, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Tool to build force field input files for molecular simulation☆196Apr 1, 2026Updated 3 weeks ago
- LAMMPS tutorials for Beginners☆462Feb 19, 2023Updated 3 years ago
- An open-source Python package for creating fast and accurate interatomic potentials.☆352Feb 6, 2026Updated 2 months ago
- MD2D: a python module for accurate determination of diffusion coefficient from molecular dynamics☆22Feb 17, 2023Updated 3 years ago
- Generate PEG topology for GROMACS and LAMMPS☆25Aug 19, 2024Updated last year
- ☆35Jul 18, 2025Updated 9 months ago
- Coarse grain to atomistic molecular coordinate and topology converter☆16Mar 13, 2025Updated last year
- A lammps fix module to perform path integral molecular dynamics (PIMD) tasks.☆11May 28, 2022Updated 3 years ago
- A fast, clean, and composable toolkit for molecular modeling☆39Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A GUI program for plotting Minimal energy path on potential energy surface.☆42Jan 18, 2021Updated 5 years ago
- Running a molecular simulation with the polarizable force field in LAMMPS☆21Jan 9, 2023Updated 3 years ago
- A tool for performing post-processing of lammps log files☆12Jul 28, 2021Updated 4 years ago
- generate HPC scheduler systems jobs input scripts and submit these scripts to HPC systems and poke until they finish☆57Apr 20, 2026Updated last week
- Common molecule fragments for visualization in Avogadro☆17Apr 1, 2026Updated 3 weeks ago
- LAMMPS extension to capture electron-ion interaction. This is a mirror of https://gitlab.com/artuuuro/USER-EPH.☆18Apr 22, 2026Updated last week
- Atomistic Manipulation Toolkit☆95Aug 4, 2025Updated 8 months ago
- an automatic reaction network generator for reactive molecular dynamics simulation☆98Apr 20, 2026Updated last week
- ☆74May 4, 2023Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆16Oct 29, 2025Updated 6 months ago
- Contains the MD model used in the article Dewapriya and Miller, J. Appl. Mech. 88(10): 101005 (2021).☆13Jul 14, 2021Updated 4 years ago
- pyiron_atomistics - an integrated development environment (IDE) for atomistic simulation in computational materials science.☆51Apr 21, 2026Updated last week
- RMD_digging is aimed to provide pre-processing and post-processing tools for the reactive molecular dynamics (ReaxFF) simulations based o…☆51Apr 13, 2026Updated 2 weeks ago
- Lava is a general-purpose calculator that provides a python interface to enable one-click calculation of the many common properties with …☆18May 31, 2022Updated 3 years ago
- A software for automating materials science computations☆35Apr 20, 2026Updated last week
- On-the-fly calculation of Transport Properties☆28Jun 19, 2023Updated 2 years ago