YFullTeam / YTreeLinks
YFull YTree
☆12Updated 2 months ago
Alternatives and similar repositories for YTree
Users that are interested in YTree are comparing it to the libraries listed below
Sorting:
- Tools test whether admixture occurred and more☆210Updated last year
- Yet another LLM command line interface☆16Updated 10 months ago
- ☆85Updated 4 months ago
- Identifying Y-chromosome haplogroups in arbitrarily large samples of sequenced or genotyped men☆111Updated 3 weeks ago
- an admixture analysis tool for Python that supports raw data from 23andme, AncestryDNA, etc.☆71Updated 3 years ago
- Tools to work with variant call format files☆263Updated last week
- an R package for ancestry analysis☆37Updated 6 years ago
- Tools for manipulating sequence graphs in the GFA and rGFA formats☆238Updated last year
- Kraken taxonomic sequence classification system☆217Updated 4 years ago
- convert your 23andme raw file to VCF | DEPRECATED, please see https://github.com/plantimals/2vcf☆98Updated 6 years ago
- tools for genetic genealogy and the analysis of consumer DNA test results☆168Updated 3 months ago
- Interactively explore metagenomes and more from a web browser.☆491Updated 3 years ago
- Implementation of the Pairwise Sequentially Markovian Coalescent (PSMC) model☆174Updated this week
- Estimating Effective Migration Surfaces☆107Updated 2 years ago
- A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster to…☆171Updated last month
- Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Imm…☆273Updated last week
- A fully reproducible and state-of-the-art ancient DNA analysis pipeline☆186Updated last week
- Finds SNP sites from a multi-FASTA alignment file☆268Updated 4 years ago
- Smith-Waterman local aligner☆72Updated 3 years ago
- VCF-kit: Assorted utilities for the variant call format☆131Updated 3 months ago
- Small utilities for working with fastq sequence files.☆123Updated 3 years ago
- A tool set for short variant discovery in genetic sequence data.☆202Updated 4 years ago
- Eigen tools by Nick Patterson and Alkes Price lab☆192Updated 2 years ago
- bioBakery workflows is a collection of workflows and tasks for executing common microbial community analyses using standardized, validate…☆123Updated 2 weeks ago
- Programs to analyse NGS data for population genetics purposes☆177Updated last year
- A workflow for integrating ancient lineages into present-day phylogenies.☆29Updated 3 months ago
- The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra.☆218Updated 2 years ago
- FASTA/FASTQ pre-processing programs☆191Updated 3 years ago
- convert 23andme or Ancestry.com raw genotype calls into VCF format, with dbSNP annotations☆59Updated 6 years ago
- A python package to query different databases of boldsystems.org☆32Updated last year