VirtualFlow / VFLPLinks
VirtualFlow for Ligand Preparation
☆60Updated 3 months ago
Alternatives and similar repositories for VFLP
Users that are interested in VFLP are comparing it to the libraries listed below
Sorting:
- ☆78Updated 4 years ago
- DockStream: A Docking Wrapper to Enhance De Novo Molecular Design☆126Updated 2 years ago
- ☆98Updated 9 months ago
- AutoDock CrankPep for peptide and disordered protein docking☆53Updated last month
- Calculation of interatomic interactions in molecular structures☆83Updated 3 years ago
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆76Updated 8 months ago
- Package for storage and analysis of virtual screenings run with AutoDock-GPU and AutoDock Vina☆55Updated last month
- ☆52Updated 3 years ago
- CHAPERONg: An automated pipeline for GROMACS MD simulations and trajectory analyses☆57Updated 4 months ago
- This is a machine-learning based protein-ligand scoring function.☆52Updated 5 years ago
- MM-PBSA method for GROMACS. For full description, please visit homepage:☆69Updated 6 months ago
- De novo drug design with deep interactome learning☆41Updated 6 months ago
- A pocket volume analyzer for use in protein modeling.☆58Updated 3 years ago
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆36Updated last week
- EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling☆29Updated 3 weeks ago
- Scripts for virtual screening, cross docking and protein relax using Schrödinegr and Rosetta☆84Updated 8 months ago
- Simple protein-ligand complex simulation with OpenMM☆91Updated 2 years ago
- Analysis of contacts in molecular dynamics trajectories☆44Updated 6 years ago
- Vina-GPU 2.0 accelerates AutoDock Vina and its related commonly derived docking methods, such as QuickVina 2 and QuickVina-W with GPUs.☆112Updated 2 years ago
- implicit or explicit water model based docking with Autodock vina engine. supporting pharmacophore /position constrained docking☆69Updated 8 months ago
- A Consensus Docking Plugin for PyMOL☆79Updated last year
- Interface to OpenMM for easy setup of molecular dynamic simulations of protein-ligand complexes☆156Updated this week
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆43Updated 2 weeks ago
- ☆33Updated last year
- A platform for systematic ADME evaluation of drug molecules, thereby accelerating the drug discovery process.☆75Updated last year
- Scores for Hydrophobicity and Charges based on SASAs☆40Updated 5 months ago
- 3D pharmacophore signatures and fingerprints☆111Updated 7 months ago
- ☆19Updated 10 months ago
- Collection of tools to calculate properties of natural or synthetic peptides and proteins.☆45Updated 2 weeks ago
- Fully automated high-throughput MD pipeline☆85Updated 3 months ago