VirtualFlow / VFLPLinks
VirtualFlow for Ligand Preparation
☆60Updated 4 months ago
Alternatives and similar repositories for VFLP
Users that are interested in VFLP are comparing it to the libraries listed below
Sorting:
- ☆78Updated 4 years ago
- Package for storage and analysis of virtual screenings run with AutoDock-GPU and AutoDock Vina☆56Updated last week
- DockStream: A Docking Wrapper to Enhance De Novo Molecular Design☆127Updated 2 years ago
- Simple protein-ligand complex simulation with OpenMM☆91Updated 2 years ago
- ☆100Updated 10 months ago
- Automatic gromacs protocol from preparation to production with ligand parametrization through☆77Updated 8 months ago
- A Consensus Docking Plugin for PyMOL☆79Updated last year
- Calculation of interatomic interactions in molecular structures☆83Updated 3 years ago
- MM-PBSA method for GROMACS. For full description, please visit homepage:☆68Updated 7 months ago
- Scripts for virtual screening, cross docking and protein relax using Schrödinegr and Rosetta☆85Updated 8 months ago
- CHAPERONg: An automated pipeline for GROMACS MD simulations and trajectory analyses☆58Updated 4 months ago
- (Windows) AMDock: Assisted molecular docking with AutoDock4 and AutoDockVina☆68Updated 3 years ago
- 3D pharmacophore signatures and fingerprints☆111Updated 7 months ago
- A platform for systematic ADME evaluation of drug molecules, thereby accelerating the drug discovery process.☆75Updated last year
- RF-Score-VS - Random forest based protein-ligand scoring function for Virtual Screening☆49Updated 7 years ago
- ☆52Updated 3 years ago
- Interface to OpenMM for easy setup of molecular dynamic simulations of protein-ligand complexes☆157Updated 3 weeks ago
- Deep Site and Docking Pose (DSDP) is a blind docking strategy accelerated by GPUs, developed by Gao Group. For the site prediction part, …☆63Updated 6 months ago
- A pocket volume analyzer for use in protein modeling.☆59Updated 3 years ago
- Collection of tools to calculate properties of natural or synthetic peptides and proteins.☆45Updated last week
- Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file☆36Updated this week
- Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation☆134Updated 2 years ago
- EnzyHTP is a python library that automates the complete life-cycle of enzyme modeling☆30Updated last month
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆44Updated last month
- Analysis of contacts in molecular dynamics trajectories☆45Updated 6 years ago
- ☆19Updated 11 months ago
- AutoDock CrankPep for peptide and disordered protein docking☆55Updated 2 months ago
- De novo drug design with deep interactome learning☆41Updated 6 months ago
- (Linux and macOS) AMDock: Assisted molecular docking with AutoDock4 and AutoDockVina☆74Updated 2 years ago
- Vina-GPU 2.0 accelerates AutoDock Vina and its related commonly derived docking methods, such as QuickVina 2 and QuickVina-W with GPUs.☆113Updated 2 years ago