Liu-Hy / GenoTEXLinks
GenoTEX: A multi-task benchmark for LLM agentic methods in automated gene expression data analysis.
☆22Updated 3 months ago
Alternatives and similar repositories for GenoTEX
Users that are interested in GenoTEX are comparing it to the libraries listed below
Sorting:
- Agent self-driven repository on bio-agent papers, i.e. papers on LLM-based agents in biology and medicine.☆52Updated last week
- ☆13Updated 4 months ago
- BulkRNABert and MOJO☆26Updated last week
- BioDiscoveryAgent is an LLM-based AI agent for closed-loop design of genetic perturbation experiments☆75Updated last week
- ☆29Updated last year
- PDD: Awesome Phenotypic Drug Discovery☆29Updated this week
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆88Updated last year
- ☆33Updated 2 years ago
- ☆35Updated 2 months ago
- A curated list of LLM powered AI Agents in Biomedical Research. Medical Image Analysis, Multi-omics Genomics Analysis, Biomedical Scienti…☆38Updated 7 months ago
- ☆72Updated 10 months ago
- AI-Driven Digital Organism (AIDO) is a system of multiscale foundation models for predicting, simulating and programming biology at all l…☆105Updated last week
- P-NET, Biologically informed deep neural network for prostate cancer classification and discovery☆156Updated 3 years ago
- [NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models☆45Updated 11 months ago
- Gene expression time-series extrapolation for heterogeneous data☆17Updated 2 years ago
- BioKGBench: A Knowledge Graph Checking Benchmark of AI Agent for Biomedical Science☆20Updated 9 months ago
- Official repo for Recursion's accepted spotlight paper at NeurIPS 2023 Generative AI & Biology workshop.☆63Updated last month
- Awesome-AI-Virtual-Cell☆36Updated this week
- [NeurIPS 2023] Official codes of "MuSe-GNN: Learning Unified Gene Representation From Multimodal Biological Graph Data"☆30Updated 2 weeks ago
- ChatCell: Facilitating Single-Cell Analysis with Natural Language☆51Updated last month
- [COLM 2024] Large Language Models as Biomedical Hypothesis Generators: A Comprehensive Evaluation☆14Updated last year
- Generative Pretraining from Transcriptomes☆15Updated 2 years ago
- ICLR'24 | BioBridge: Bridging Biomedical Foundation Models via Knowledge Graphs☆74Updated last year
- Pytorch implementation of EpiFoundation☆20Updated 4 months ago
- ☆14Updated 2 years ago
- Madrigal: Multimodal AI predicts clinical outcomes of drug combinations from preclinical data☆29Updated 3 months ago
- ☆103Updated 5 months ago
- Raman2RNA code base.☆11Updated last year
- ☆41Updated last year
- A collection of awesome bio-foundation models, including protein, RNA, DNA, gene, single-cell, and so on.☆234Updated last month