AI Agent 科研全流程教学包,能教学生从零部署 Codex、Claude Code、OpenClaw、Hermes 等 Agent,学会使用 Skills、飞书、AMiner、AI4Scholar、Zotero、Obsidian 等工具,完成真实文献检索、文献日报、知识库搭建、选题生成、理论建构、情景实验设计、量表开发、统计分析、因果推断、文本挖掘、EEG/ERP 实验、BCI 脑电智能建模、论文写作、审稿自查、期刊排版和盲审投稿包制作;学生学完后可以按课程模板一步步让 AI Agent 协助完成从“找文献、定选题、做实验、分析数据”到“写论文、查引用、改格式、准备投稿”的完整科研流程。
☆52May 19, 2026Updated 2 months ago
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