Alternatives and similar repositories for SAAMI

Users that are interested in SAAMI are comparing it to the libraries listed below

• mist-medical / MIST
  MIST: A simple and scalable end-to-end framework for 3D medical imaging segmentation.
  ☆49Updated 2 weeks ago
• sulaimanvesal / vertebraeSegementation
  PyTorch code: Spine and Vertebrae Segmentation
  ☆22Updated 2 years ago
• qinliuliuqin / Medical-Detection3d-Toolkit
  Landmark detection engine for 3D medical images (MICCAI workshop 2021)
  ☆46Updated 3 weeks ago
• mazurowski-lab / SegmentAnyBone
  SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI
  ☆105Updated 8 months ago
• PerceptionComputingLab / TDSC-ABUS2023
  Official repository of MICCAI 2023 TDSC-ABUS challenge
  ☆17Updated 7 months ago
• JonasLamy / LiverVesselness
  Repository for Vesselness algorithms
  ☆47Updated last year
• DIAGNijmegen / SPIDER-Baseline-IIS
  ☆22Updated last year
• lich0031 / AIDE
  AIDE: Annotation-efficient deep learning for automatic medical image segmentation
  ☆55Updated 4 years ago
• andreped / livermask
  💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model
  ☆69Updated 11 months ago
• fedesemeraro / SlicerTomoSAM
  An extension of 3D Slicer using the Segment Anything Model (SAM) to aid the segmentation of 3D data from tomography or other imaging tech…
  ☆67Updated 2 months ago
• bwittmann / transoar
  A 3D medical Detection Transformer library. Papers accepted @ MIDL22 & MELBA23/02.
  ☆69Updated last year
• amine0110 / SAM-Medical-Imaging
  ☆119Updated 2 years ago
• raidionics / AeroPath
  AeroPath: An airway segmentation benchmark dataset with challenging pathology
  ☆39Updated last month
• mazurowski-lab / SlicerSegmentWithSAM
  3D Slicer extension for Segment Anything Model (SAM) developed by Meta
  ☆63Updated 3 months ago
• YzzLiu / FracSegNet
  A deep-learning method for segmenting fractures from 3D CT images.
  ☆29Updated last year
• neuropoly / totalspineseg
  Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterat…
  ☆70Updated this week
• DIAGNijmegen / picai_prep
  Preprocessing 3D medical images and image archives —geared towards prostate cancer detection in MRI.
  ☆22Updated 5 months ago
• ysuter / gbm-data-longitudinal
  This repository contains code used to prepare the LUMIERE Glioblastoma dataset.
  ☆29Updated last year
• nadeemlab / CIR
  Clinically-Interpretable Radiomics [MICCAI'22, CMPB'21]
  ☆37Updated 2 years ago
• GSTT-CSC / TotalSegmentator-AIDE
  TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.
  ☆31Updated last year
• M3DV / RibSeg
  [MICCAI'21 & TMI'23] RibSeg Dataset and Point Cloud Baselines for Rib Segmentation from CT Scans
  ☆65Updated 8 months ago
• DIAGNijmegen / Report-Guided-Annotation
  Report Guided Annotation
  ☆22Updated 8 months ago
• arcadelab / FastSAM3D
  Code for "FastSAM3D: An Efficient Segment Anything Model for 3D Volumetric Medical Images"
  ☆102Updated 5 months ago
• MedICL-VU / ProMISe
  [ISBI 2024 Oral] ProMISe: Prompt-driven 3D Medical Image Segmentation Using Pretrained Image Foundation Models
  ☆30Updated last year
• laumerf / 4DHeartModel
  Framework to enable the inference of a high resolution personalized 4D (3D plus time) surface mesh of the cardiac structures from 2D echo…
  ☆36Updated last year
• The-Veeraraghavan-Lab / SMIT
  Self distilled masked transformer based segmentor used in MICCAI 2022 paper by Jiang J, ... Veeraraghavan H et.al
  ☆27Updated 2 years ago
• hhaentze / MRSegmentator
  ☆139Updated last month
• creatis-myriad / ASCENT
  cardiAc ultrasound Segmentation & Color-dopplEr dealiasiNg Toolbox (ASCENT)
  ☆40Updated 4 months ago
• MIC-DKFZ / anatomy_informed_DA
  ☆21Updated last year
• MIC-DKFZ / LesionLocator
  LesionLocator is a framework for zero-shot lesion segmentation and longitudinal tumor tracking in 3D full-body imaging.
  ☆67Updated last month