xiangyue9607 / BioNEVLinks
Graph Embedding Evaluation / Code and Datasets for "Graph Embedding on Biomedical Networks: Methods, Applications, and Evaluations" (Bioinformatics 2020)
☆228Updated 5 years ago
Alternatives and similar repositories for BioNEV
Users that are interested in BioNEV are comparing it to the libraries listed below
Sorting:
- Graph convolutional neural network for multirelational link prediction☆466Updated 3 years ago
- Heterogeneous Network Embedding: Survey, Benchmark, Evaluation, and Beyond☆260Updated 4 years ago
- PGCN: Disease gene prioritization by disease and gene embedding through GCN☆79Updated last year
- Gaussian node embeddings. Implementation of "Deep Gaussian Embedding of Graphs: Unsupervised Inductive Learning via Ranking".☆178Updated 2 years ago
- Implementation of R-GCNs for Relational Link Prediction☆463Updated 2 years ago
- ☆65Updated 6 years ago
- This is a TensorFlow implementation of the Adversarially Regularized Graph Autoencoder(ARGA) model as described in our paper: Pan, S., …☆187Updated 3 years ago
- embedding attributed graphs☆57Updated 3 years ago
- Distance Encoding for GNN Design☆188Updated 4 years ago
- An open-source implementation of SEAL for link prediction in open graph benchmark (OGB) datasets.☆240Updated 2 years ago
- Unsupervised Attributed Multiplex Network Embedding (AAAI 2020)☆150Updated 2 years ago
- A Network Integration Approach for Drug-Target Interaction Prediction☆185Updated 3 years ago
- ☆356Updated 5 years ago
- ☆173Updated 7 years ago
- Learning node representation using edge semantics☆54Updated 6 years ago
- Python Implementation for Random Walk with Restart (RWR)☆122Updated 3 years ago
- Metapath Aggregated Graph Neural Network for Heterogeneous Graph Embedding☆431Updated 5 years ago
- PPNP & APPNP models from "Predict then Propagate: Graph Neural Networks meet Personalized PageRank" (ICLR 2019)☆322Updated 11 months ago
- Source code for EvalNE, a Python library for evaluating Network Embedding methods.☆106Updated last year
- Code & data accompanying the NeurIPS 2020 paper "Iterative Deep Graph Learning for Graph Neural Networks: Better and Robust Node Embeddin…☆233Updated 2 years ago
- Source code from the NeurIPS 2019 workshop article "Keep It Simple: Graph Autoencoders Without Graph Convolutional Networks" (G. Salha, R…☆135Updated 5 years ago
- ☆26Updated 3 years ago
- Source code for AAAI 2019 paper "Relation Structure-Aware Heterogeneous Information Network Embedding"☆56Updated 5 years ago
- An alternative implementation of Recursive Feature and Role Extraction (KDD11 & KDD12)☆69Updated 3 years ago
- A PyTorch implementation of "Semi-Supervised Graph Classification: A Hierarchical Graph Perspective" (WWW 2019)☆212Updated 3 years ago
- An Open-Source Toolkit for Heterogeneous Information Network Embedding (HINE)☆326Updated 2 years ago
- hypergraph representation learning, graph neural network☆100Updated last year
- Implementation of "Overlapping Community Detection with Graph Neural Networks"☆170Updated 5 years ago
- Subgraph Neural Networks (NeurIPS 2020)☆202Updated 4 years ago
- A package for computing Graph Kernels☆33Updated 7 years ago