xiangyue9607 / BioNEV
Graph Embedding Evaluation / Code and Datasets for "Graph Embedding on Biomedical Networks: Methods, Applications, and Evaluations" (Bioinformatics 2020)
☆226Updated 5 years ago
Alternatives and similar repositories for BioNEV:
Users that are interested in BioNEV are comparing it to the libraries listed below
- Heterogeneous Network Embedding: Survey, Benchmark, Evaluation, and Beyond☆257Updated 4 years ago
- Graph convolutional neural network for multirelational link prediction☆457Updated 2 years ago
- Distance Encoding for GNN Design☆187Updated 4 years ago
- ☆350Updated 5 years ago
- Implementation of R-GCNs for Relational Link Prediction☆455Updated 2 years ago
- An Open-Source Toolkit for Heterogeneous Information Network Embedding (HINE)☆323Updated 2 years ago
- Metapath Aggregated Graph Neural Network for Heterogeneous Graph Embedding☆411Updated 4 years ago
- Pytorch implementation of a RGCN Link Prediction Model☆248Updated 3 years ago
- Unsupervised Attributed Multiplex Network Embedding (AAAI 2020)☆148Updated 2 years ago
- Heterogeneous Information Network Embedding☆198Updated 3 years ago
- Code & data accompanying the NeurIPS 2020 paper "Iterative Deep Graph Learning for Graph Neural Networks: Better and Robust Node Embeddin…☆227Updated last year
- Representation-Learning-on-Heterogeneous-Graph☆440Updated 5 years ago
- PPNP & APPNP models from "Predict then Propagate: Graph Neural Networks meet Personalized PageRank" (ICLR 2019)☆321Updated 4 months ago
- A PyTorch implementation of the Relational Graph Convolutional Network (RGCN).☆123Updated 3 years ago
- This is a TensorFlow implementation of the Adversarially Regularized Graph Autoencoder(ARGA) model as described in our paper: Pan, S., …☆184Updated 3 years ago
- Subgraph Neural Networks (NeurIPS 2020)☆193Updated 4 years ago
- Official Repository of "A Fair Comparison of Graph Neural Networks for Graph Classification", ICLR 2020☆393Updated 10 months ago
- code of HetGNN☆400Updated 5 years ago
- An open-source implementation of SEAL for link prediction in open graph benchmark (OGB) datasets.☆234Updated last year
- ☆186Updated 6 years ago
- Source code and dataset for KDD 2020 paper "Adaptive Graph Encoder for Attributed Graph Embedding"☆113Updated last year
- ☆296Updated 2 years ago
- ☆172Updated 6 years ago
- PGCN: Disease gene prioritization by disease and gene embedding through GCN☆77Updated last year
- GCC: Graph Contrastive Coding for Graph Neural Network Pre-Training @ KDD 2020☆326Updated last year
- [ICLR 2020; IPDPS 2019] Fast and accurate minibatch training for deep GNNs and large graphs (GraphSAINT: Graph Sampling Based Inductive L…☆483Updated 2 years ago
- hypergraph representation learning, graph neural network☆95Updated 11 months ago
- OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.☆150Updated 11 months ago
- Implementation of "Overlapping Community Detection with Graph Neural Networks"☆163Updated 4 years ago
- Gaussian node embeddings. Implementation of "Deep Gaussian Embedding of Graphs: Unsupervised Inductive Learning via Ranking".☆174Updated last year