saadwazir / HistoSeg
HistoSeg is an Encoder-Decoder DCNN which utilizes the novel Quick Attention Modules and Multi Loss function to generate segmentation masks from histopathological images with greater accuracy. This repo contains the code to Test and Train the HistoSeg
☆23Updated this week
Alternatives and similar repositories for HistoSeg:
Users that are interested in HistoSeg are comparing it to the libraries listed below
- Gland segmentation task with GlaS 2015 dataset using UNet model.☆25Updated 3 years ago
- [TMI'2021][ISBI MoNuSAC'2020] 11th place solution to Multi-organ nuclei segmentation and classification challenge.☆30Updated 3 years ago
- PyTorch implementation of segmentation models for breast ultrasound images.☆34Updated 3 years ago
- Weakly supervised nuclei segmentation using partial points annotation☆21Updated 4 years ago
- Contains code for Semantic Segmentation of MoNuSeg 2018 challenge.☆40Updated 2 years ago
- MICCAI2023 - TransNuSeg: A Lightweight Multi-Task Transformer for Nuclei Segmentation☆25Updated last year
- ☆61Updated 2 years ago
- Interactive Segmentation of Nucleus☆62Updated 2 years ago
- ☆38Updated last year
- MIA-DDTNet: A Dense Dual-Task Network for Tumor-infiltrating Lymphocyte Detection and Segmentation in Histopathological Images of Breast …☆13Updated 2 years ago
- Official implementation of ResUNet++, CRF, and TTA for segmentation of medical images (IEEE JBIHI)☆124Updated last year
- Nuclei segmentation and classification (Cancer cells)☆23Updated 10 months ago
- CS-Net (MICCAI 2019) and CS2-Net (MedIA 2020)☆100Updated 2 years ago
- This is a pytorch project about medical segmentation☆57Updated 3 years ago
- The code of WEAKLY SUPERVISED NUCLEI SEGMENTATION VIA INSTANCE LEARNING☆16Updated 2 years ago
- Use this to download all elements of the BCSS dataset described in: Amgad M, Elfandy H, ..., Gutman DA, Cooper LAD. Structured crowdsourc…☆152Updated 3 years ago
- this repo is for Grand Challenge WSSS4LUAD, detail information about the contest is on https://wsss4luad.grand-challenge.org/WSSS4LUAD/☆19Updated 2 years ago
- pytorch implementation for The Fully Convolutional Transformer(FCT)☆40Updated last year
- NuLite - Lightweight and Fast Model for Nuclei Instance Segmentation and Classification☆21Updated 7 months ago
- ☆112Updated 3 years ago
- The code will be released after the paper is published☆6Updated last year
- Deeplabv3 plus 3D version (in pytorch)☆35Updated 6 years ago
- Pix2Pix-based Stain-to-Stain Translation: A Solution for Robust Stain Normalization in Histopathology Images Analysis☆33Updated 5 years ago
- we proposes a dual input semantic segmentation network for WSI based on attention☆15Updated 5 years ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆54Updated 3 years ago
- Deep Multi-Magnification Network for multi-class tissue segmentation of whole slide images☆25Updated 2 years ago
- [MICCAI 2023] Official Pytorch Implementation for "CellGAN: Conditional Cervical Cell Synthesis for Augmenting Cytopathological Image Cla…☆29Updated last month
- MICCAI2020. "Multiple Instance Learning with Center Embeddings for Histopathology Image Classification"☆38Updated 4 years ago
- TransDeepLab: Convolution-Free Transformer-based DeepLab v3+ for Medical Image Segmentation☆80Updated 2 years ago
- This repo is the source code for [BiTr-Unet: a CNN-Transformer Combined Network for MRI Brain Tumor Segmentation].☆32Updated 2 years ago