HistoSeg is an Encoder-Decoder DCNN which utilizes the novel Quick Attention Modules and Multi Loss function to generate segmentation masks from histopathological images with greater accuracy. This repo contains the code to Test and Train the HistoSeg
☆26Apr 11, 2025Updated last year
Alternatives and similar repositories for HistoSeg
Users that are interested in HistoSeg are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Nuclei segmentation and classification (Cancer cells)☆25Jun 4, 2024Updated last year
- ☆14Jun 14, 2022Updated 3 years ago
- Gland segmentation task with GlaS 2015 dataset using UNet model.☆27Mar 24, 2022Updated 4 years ago
- Pre-processing and post-processing for biomedical image analysis☆18Dec 11, 2024Updated last year
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆73Nov 21, 2022Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Reproducible analyses for the NicheCompass manuscript☆14Jul 3, 2025Updated 10 months ago
- ☆59Apr 14, 2025Updated last year
- ☆16Jul 15, 2025Updated 10 months ago
- Repository for ICCV2021 MCSpatNet: Multi-Class Cell Detection Using Spatial Context Representation☆27Jun 27, 2023Updated 2 years ago
- Deeply supervised density regression for automatic cell counting in microscopy images☆12Jan 31, 2022Updated 4 years ago
- Pytorch implementation of FullNet-varCE☆54Feb 17, 2021Updated 5 years ago
- Reproduce analyses and baselines from the State paper☆14Feb 25, 2026Updated 3 months ago
- NeST-VNN repo☆12Jun 13, 2025Updated 11 months ago
- Search, download, and prepare brain atlas data.☆17Mar 10, 2023Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A system for building mouse brain atlas from histology series☆11Aug 15, 2020Updated 5 years ago
- Code for spatial subclone paper☆18Jan 23, 2025Updated last year
- A computational tool for identification of 3D multi-modal spatial neighborhoods☆15Aug 1, 2025Updated 9 months ago
- ☆15Dec 30, 2024Updated last year
- IEEE TMI 2021: AdaCon: Adaptive Contrast for Image Regression in Computer-Aided Disease Assessment☆21Mar 21, 2022Updated 4 years ago
- MICCAI 2021 : Self-Supervised Correction Learning for Semi-Supervised Biomedical Image Segmentation (Pytorch implementation).☆26Jan 12, 2023Updated 3 years ago
- A comprehensive tool to infer TF-centred, spatial gene regulatory networks for the spatially resolved transcriptomic data.☆21Apr 27, 2025Updated last year
- Segment Anything for Histopathology☆64May 5, 2026Updated 3 weeks ago
- Code for [MLMI 2019] [KiPA22 Challenge] [AMOS 2022 Challenge] [MICCAI 2022 Workshop] Boundary-Aware Network for Medical Image Segmentatio…☆16Mar 21, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Camera control for ssing OpenCv and Qt ;OpenCv+Qt 摄像头控制☆10Apr 29, 2021Updated 5 years ago
- Efficient subtyping of ovarian cancer histopathology whole slide images using active sampling in multiple instance learning☆11Mar 19, 2024Updated 2 years ago
- 使用ONNXRuntime部署一种用于边缘检测的轻量级密集卷积神经网络LDC，包含C++和Python两个版本的程序☆11Apr 24, 2023Updated 3 years ago
- watermark video delogo☆10Nov 27, 2020Updated 5 years ago
- High-throughput Detection of Neurons for Brain-wide analysis with Deep Learning☆18Feb 21, 2022Updated 4 years ago
- Training medical image segmentation models with limited labeled data.☆16Jul 17, 2024Updated last year
- Histopathology whole slide image library☆16May 22, 2026Updated last week
- ☆12Mar 22, 2023Updated 3 years ago
- ☆11Jun 7, 2021Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- This repository contains my implementations of the algorithms which we used for evaluation of the MoNuSeg challenge at MICCAI 2018.☆43Jul 22, 2021Updated 4 years ago
- ☆12Oct 4, 2023Updated 2 years ago
- NuInsSeg: A Fully Annotated Dataset for Nuclei Instance Segmentation in H&E-Stained Histological Images☆41Jul 15, 2024Updated last year
- [3D GeoInfo 2025] RoofSense: A Multimodal Semantic Segmentation Dataset for Roofing Material Classification☆11Jul 3, 2025Updated 10 months ago
- Interactive Segmentation of Nucleus☆67Nov 22, 2022Updated 3 years ago
- My thesis project☆10Jun 7, 2021Updated 4 years ago
- MASS: Modality-collaborative semi-supervised segmentation by exploiting cross-modal consistency from unpaired CT and MRI images☆13May 25, 2022Updated 4 years ago