HistoSeg is an Encoder-Decoder DCNN which utilizes the novel Quick Attention Modules and Multi Loss function to generate segmentation masks from histopathological images with greater accuracy. This repo contains the code to Test and Train the HistoSeg
☆24Apr 11, 2025Updated 11 months ago
Alternatives and similar repositories for HistoSeg
Users that are interested in HistoSeg are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Nuclei segmentation and classification (Cancer cells)☆25Jun 4, 2024Updated last year
- ☆13Jun 14, 2022Updated 3 years ago
- Gland segmentation task with GlaS 2015 dataset using UNet model.☆26Mar 24, 2022Updated 4 years ago
- The implementation of the MICCAI paper entitled "A deep model with shape-preserving loss for gland instance segmentation"☆10Nov 18, 2018Updated 7 years ago
- Pre-processing and post-processing for biomedical image analysis☆18Dec 11, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆73Nov 21, 2022Updated 3 years ago
- Reproducible analyses for the NicheCompass manuscript☆13Jul 3, 2025Updated 8 months ago
- ☆57Apr 14, 2025Updated 11 months ago
- Repository for ICCV2021 MCSpatNet: Multi-Class Cell Detection Using Spatial Context Representation☆25Jun 27, 2023Updated 2 years ago
- Deeply supervised density regression for automatic cell counting in microscopy images☆12Jan 31, 2022Updated 4 years ago
- Reproduce analyses and baselines from the State paper☆15Feb 25, 2026Updated last month
- Pytorch implementation of FullNet-varCE☆55Feb 17, 2021Updated 5 years ago
- CoNIC Challenge☆69Feb 19, 2024Updated 2 years ago
- NeST-VNN repo☆12Jun 13, 2025Updated 9 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Code for spatial subclone paper☆17Jan 23, 2025Updated last year
- A system for building mouse brain atlas from histology series☆11Aug 15, 2020Updated 5 years ago
- Search, download, and prepare brain atlas data.☆17Mar 10, 2023Updated 3 years ago
- this repo is for Grand Challenge WSSS4LUAD, detail information about the contest is on https://wsss4luad.grand-challenge.org/WSSS4LUAD/☆20Apr 29, 2022Updated 3 years ago
- Pytorch implementation of Count-ception and custom CNN counting models for Kaggle Sea Lion Count challenge☆11Jun 30, 2017Updated 8 years ago
- ☆15Dec 30, 2024Updated last year
- IEEE TMI 2021: AdaCon: Adaptive Contrast for Image Regression in Computer-Aided Disease Assessment☆21Mar 21, 2022Updated 4 years ago
- Segment Anything for Histopathology☆59Updated this week
- A comprehensive tool to infer TF-centred, spatial gene regulatory networks for the spatially resolved transcriptomic data.☆21Apr 27, 2025Updated 11 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- MICCAI 2021 : Self-Supervised Correction Learning for Semi-Supervised Biomedical Image Segmentation (Pytorch implementation).☆26Jan 12, 2023Updated 3 years ago
- Code for [MLMI 2019] [KiPA22 Challenge] [AMOS 2022 Challenge] [MICCAI 2022 Workshop] Boundary-Aware Network for Medical Image Segmentatio…☆16Mar 21, 2023Updated 3 years ago
- Efficient subtyping of ovarian cancer histopathology whole slide images using active sampling in multiple instance learning☆11Mar 19, 2024Updated 2 years ago
- Source code of SACD(Super-resolution with Auto-Correlation two-step Deconvolution)☆13Dec 12, 2022Updated 3 years ago
- 使用ONNXRuntime部署一种用于边缘检测的轻量级密集卷积神经网络LDC,包含C++和Python两个版本的程序☆11Apr 24, 2023Updated 2 years ago
- watermark video delogo☆11Nov 27, 2020Updated 5 years ago
- High-throughput Detection of Neurons for Brain-wide analysis with Deep Learning☆18Feb 21, 2022Updated 4 years ago
- [MedIA 2023] "Superficial White Matter Analysis: An Efficient Point-cloud-based Deep Learning Framework with Supervised Contrastive Learn…☆24Jul 21, 2023Updated 2 years ago
- Code for blogpost https://zablo.net/blog/post/understanding-implementing-simclr-guide-eli5-pytorch/☆20Jul 27, 2020Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Training medical image segmentation models with limited labeled data.☆15Jul 17, 2024Updated last year
- A lightweight and multiscale network for biomedical image segmentation☆10Apr 8, 2021Updated 4 years ago
- Histopathology whole slide image library☆16Mar 20, 2026Updated last week
- Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.☆698Oct 27, 2023Updated 2 years ago
- [ECAI 2023] Official PyTorch implementation of the paper "Semantic-Aware Dual Contrastive Learning for Multi-label Image Classification"☆23Nov 12, 2023Updated 2 years ago
- ☆12Mar 22, 2023Updated 3 years ago
- ☆11Jun 7, 2021Updated 4 years ago