Alternatives and similar repositories for subgraph-isomorphism

Users that are interested in subgraph-isomorphism are comparing it to the libraries listed below

• kb1dds / simplicialHomology

  View on GitHub
  A simple Python 2.7 module for computing local and relative simplicial homology
  ☆14Nov 21, 2023Updated 2 years ago
• CharlotteMagister / GCExplainer

  View on GitHub
  ☆19Jan 17, 2024Updated 2 years ago
• pietrobarbiero / entropy-lens

  View on GitHub
  ☆18Mar 9, 2023Updated 2 years ago
• maxwshen / gflownet

  View on GitHub
  ☆19May 11, 2023Updated 2 years ago
• dbsxodud-11 / ls_gfn

  View on GitHub
  Official Code for Local Search GFlowNets (ICLR 2024 Spotlight)
  ☆24Feb 27, 2025Updated 11 months ago
• HekpoMaH / algorithmic-concepts-reasoning

  View on GitHub
  ☆25Jul 15, 2021Updated 4 years ago
• betterenvi / Ullman-Isomorphism

  View on GitHub
  Ullman Algorithm - An Algorithm for Subgraph Isomorphism
  ☆27Jul 6, 2023Updated 2 years ago
• HKUST-KnowComp / DualMessagePassing

  View on GitHub
  Source Code for AAAI 2022 paper "Graph Convolutional Networks with Dual Message Passing for Subgraph Isomorphism Counting and Matching"
  ☆23Nov 13, 2022Updated 3 years ago
• jdmoorman / uclasm

  View on GitHub
  Subgraph matching and isomorphisms in Python.
  ☆28Nov 3, 2022Updated 3 years ago
• gchojnowski / gapTrick

  View on GitHub
  rebuilds and completes models of protein complexes using AlphaFold2
  ☆15Jan 22, 2026Updated 3 weeks ago
• Ayeshmadu / QM40_dataset_for_ML

  View on GitHub
  QM40 is a QMx type of dataset which includes 150K molecules optimized from B3LYP/6-31G(2df,p) level of theory in the Gaussian16 with QM p…
  ☆20Mar 25, 2025Updated 10 months ago
• Form2Seq-Data / Dataset

  View on GitHub
  Dataset corresponding to the paper: "Form2Seq : A Framework for Higher-Order Form Structure Extraction"
  ☆10Feb 17, 2021Updated 4 years ago
• KrishnaswamyLab / Cell-Dynamics-Pipeline

  View on GitHub
  ☆10Dec 8, 2023Updated 2 years ago
• instadeepai / DEgym

  View on GitHub
  A LLM-friendly framework for translating dynamical equations to gymnasium-compatible RL environments.
  ☆33Oct 16, 2025Updated 3 months ago
• adelshb / graphqec

  View on GitHub
  A library for analyzing Quantum Error Correction Codes from their Tanner Graphs.
  ☆14Aug 23, 2025Updated 5 months ago
• daviesl / trjp

  View on GitHub
  Source code repository for the AISTAT 2023 paper Transport Reversible Jump Proposals.
  ☆10Mar 3, 2023Updated 2 years ago
• psn417 / nep_maker

  View on GitHub
  ☆12Apr 9, 2025Updated 10 months ago
• matmi8 / Zernike2D

  View on GitHub
  ☆10Apr 30, 2025Updated 9 months ago
• sbravyi / symmetric_group_characters

  View on GitHub
  Matrix Product State algorithm for computing characters of the symmetric group S_n
  ☆11Sep 26, 2025Updated 4 months ago
• skimbleshank / upgma

  View on GitHub
  Demonstration of the UPGMA hierarchal clustering algorithm in Pandas, Seaborn, and Scipy
  ☆11Sep 29, 2019Updated 6 years ago
• XuanzhouLiu / D2Match-ICML23

  View on GitHub
  Implementation of paper "D2Match: Leveraging Deep Learning and Degeneracy for Subgraph Matching"
  ☆13Dec 30, 2023Updated 2 years ago
• ddingding / CoVES

  View on GitHub
  Protein scoring and sampling of 'Combinatorial Variant Effects from Structure' (CoVES)
  ☆11Jan 5, 2024Updated 2 years ago
• apolanco115 / hcp

  View on GitHub
  hierarchical core-periphery structure
  ☆10Jul 21, 2023Updated 2 years ago
• kantamasuki / RGDM

  View on GitHub
  Implementations of the renormalization group-based diffusion model (RGDM).
  ☆16Mar 10, 2025Updated 11 months ago
• thejonaslab / vonmises-icml-2023

  View on GitHub
  ☆10Jun 24, 2023Updated 2 years ago
• asFeng / Diffuser

  View on GitHub
  ☆10Jun 14, 2023Updated 2 years ago
• GlycanML / GlycanML

  View on GitHub
  ☆13Jun 5, 2024Updated last year
• atla-ai / atla-sdk-python

  View on GitHub
  The official Python library for the Atla API
  ☆15Jul 21, 2025Updated 6 months ago
• kimvc7 / HDL

  View on GitHub
  ☆12Mar 15, 2023Updated 2 years ago
• tdavislab / amt

  View on GitHub
  A Structural Average of Labeled Merge Trees for Uncertainty Visualization
  ☆11Apr 22, 2024Updated last year
• idiap / nvib

  View on GitHub
  A nonparametric variational information bottleneck (NVIB) layer in Pytorch
  ☆11Apr 15, 2025Updated 9 months ago
• merlresearch / partial_gcnn

  View on GitHub
  Source code accompanying the NeurIPS 2022 paper "Learning Partial Equivariances From Data"
  ☆10Nov 18, 2022Updated 3 years ago
• seonghann / tsdiff

  View on GitHub
  Diffusion model for transition state prediction
  ☆46Nov 30, 2023Updated 2 years ago
• GFNOrg / GFlowNet-EM

  View on GitHub
  Code for GFlowNet-EM, a novel algorithm for fitting latent variable models with compositional latents and an intractable true posterior.
  ☆42Feb 9, 2024Updated 2 years ago
• nlpAThits / figet-hyperbolic-space

  View on GitHub
  Code for the paper "Fine-Grained Entity Typing in Hyperbolic Space"
  ☆38Jan 15, 2020Updated 6 years ago
• pasqal-io / qex

  View on GitHub
  JAX-based differentiable Kohn-Sham Density Functional Theory implementation for training quantum(-enhanced) neural exchange-correlation f…
  ☆18Jan 29, 2026Updated 2 weeks ago
• BurgerAndreas / hip

  View on GitHub
  HIP: Hessians with Interatomic Potentials
  ☆28Feb 6, 2026Updated last week
• flowersteam / sbmltoodejax

  View on GitHub
  ☆13Dec 20, 2024Updated last year
• longhorn / backing-image-manager

  View on GitHub
  ☆10Updated this week