ntamas / cl1
Overlapping clustering algorithm for biological and non-biological networks alike
☆14Updated 7 years ago
Alternatives and similar repositories for cl1
Users that are interested in cl1 are comparing it to the libraries listed below
Sorting:
- An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms☆17Updated 5 years ago
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Updated last year
- Deep learning embedding for nucleotide sequences☆18Updated last month
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆26Updated 4 months ago
- A 3-Dimensional View of Human Metabolism and Disease☆27Updated 7 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- Deep learning based prediction of IsoForm FUnctions from Sequences and Expression☆15Updated 3 years ago
- COSMIS is a framework for quantifying the mutational constraint on amino acid sites in 3D spatial neighborhoods. The framework currently …☆17Updated 2 years ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆38Updated last month
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆26Updated 2 years ago
- iCodon customizes gene expression based on the codon composition☆15Updated last year
- Comprehensive Python client for the Uniprot REST API☆49Updated 8 months ago
- Comparison of Adaptive Immune Receptor Repertoires☆27Updated 3 months ago
- A BioJS viewer for protein sequence features☆49Updated 2 years ago
- Detects hotspot regions for somatic mutations in 3D protein structures☆2Updated last year
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- Javascript package for embedding sequence logos☆15Updated 2 years ago
- Python package to plot sequence logos☆29Updated last year
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆27Updated last month
- GraphProt: modelling binding preferences of RNA-binding proteins☆21Updated 6 years ago
- Interactive tutorials for using scikit-bio in biological research☆24Updated 10 months ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆20Updated 2 years ago
- Converts Ensembl, Uniprot, and HGNC IDs to Entrez Gene Id☆45Updated last year
- Pipeline to apply encoded Kmer analysis to protein sequences☆16Updated last month
- Python bindings for the TaxonKit library☆39Updated last month
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆72Updated last week
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆27Updated 6 years ago
- Feature map and function annotation of Proteins☆33Updated 11 months ago
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆19Updated 2 years ago
- ☆15Updated last month