Variational Autoencoder for Dimensionality Reduction of Time-Series
☆189May 1, 2022Updated 4 years ago
Alternatives and similar repositories for vde
Users that are interested in vde are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Deep learning meets molecular dynamics.☆189May 3, 2019Updated 7 years ago
- Enhanced protein mutational sampling using time-lagged variational autoencoders☆30Sep 17, 2018Updated 8 years ago
- Keras framework for autocovariance-based dimensionality reduction of time series data with deep neural networks.☆31Jan 24, 2018Updated 8 years ago
- Statistical models for biomolecular dynamics☆168Jan 26, 2021Updated 5 years ago
- How to analyze molecular dynamics data with PyEMMA☆88May 29, 2019Updated 7 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Winter is coming...☆14Jan 23, 2019Updated 7 years ago
- Lstm variational auto-encoder for time series anomaly detection and features extraction☆339Jun 24, 2020Updated 6 years ago
- A general small molecule force field descended from AMBER99 and parm@Frosst, available in the SMIRNOFF format☆31Feb 18, 2026Updated 7 months ago
- Automated omics-scale protein modeling and simulation setup.☆53Sep 20, 2021Updated 5 years ago
- Sequence-to-sequence autoencoder for unsupervised learning of nonlinear dynamics (Tensorflow).☆30Dec 29, 2021Updated 4 years ago
- A python framework to run adaptive Markov state model (MSM) simulation on HPC resources☆17Aug 1, 2025Updated last year
- Differentiate all the things!☆178Jan 9, 2026Updated 9 months ago
- Graph Inference on MoLEcular Topology☆26Mar 25, 2023Updated 3 years ago
- Variational Recurrent Autoencoder for timeseries clustering in pytorch☆493Jul 6, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆14May 13, 2020Updated 6 years ago
- A CNN + Auto-Encoder Approach for Predicting Financial Time-Series☆12May 16, 2019Updated 7 years ago
- Modeling and Bayesian analysis of fluorescence and absorbance assays.☆19Sep 20, 2021Updated 5 years ago
- Differentiable molecular simulation of proteins with a coarse-grained potential☆56Apr 3, 2025Updated last year
- Code for the results of the Paper:☆21May 17, 2018Updated 8 years ago
- Auto encoder for time series☆439Nov 8, 2019Updated 6 years ago
- Learning free energy landscapes using artificial neural networks☆16Nov 30, 2017Updated 8 years ago
- Autoregressive Energy Machines☆78Nov 22, 2022Updated 3 years ago
- An open, extensible Python framework for GPU-accelerated alchemical free energy calculations.☆203Jul 6, 2023Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Python implementation of the multistate Bennett acceptance ratio (MBAR)☆318Feb 12, 2026Updated 7 months ago
- Molecular dynamics trajectory analysis in Tensorflow☆37Jun 21, 2017Updated 9 years ago
- Modeling molecular ensembles with scalable data structures and parallel computing☆37Mar 11, 2026Updated 6 months ago
- TensorFlow implementation of the SOM-VAE model as described in https://arxiv.org/abs/1806.02199☆198Mar 24, 2023Updated 3 years ago
- Python library for analysis of time series data including dimensionality reduction, clustering, and Markov model estimation☆891Jun 26, 2026Updated 3 months ago
- Unsupervised Scalable Representation Learning for Multivariate Time Series: Experiments☆405Jul 31, 2024Updated 2 years ago
- Predict allosteric pockets on proteins☆15Mar 28, 2022Updated 4 years ago
- Tensorflow + Molecules = TensorMol☆276Feb 11, 2021Updated 5 years ago
- Generate canonical molecule identifiers for quantum chemistry database☆23May 17, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Scripts to interface TorchANI NNP with NAMD☆33Apr 28, 2026Updated 5 months ago
- Neural-Network representation of Quantum Systems☆44Apr 29, 2020Updated 6 years ago
- 🚂 Python API for Emma's Markov Model Algorithms 🚂☆340Sep 11, 2023Updated 3 years ago
- A primer on software development best practices for computational chemistry☆278Dec 5, 2022Updated 3 years ago
- Tools for preparation and analysis of systems for molecular dynamics.☆32Dec 5, 2025Updated 10 months ago
- TorchANI 2.0 is an open-source library that supports training, development, and research of ANI-style neural network interatomic potentia…☆563Sep 6, 2026Updated last month
- Folding@home GPU benchmark☆36Jan 9, 2023Updated 3 years ago