Variational Autoencoder for Dimensionality Reduction of Time-Series
☆189May 1, 2022Updated 4 years ago
Alternatives and similar repositories for vde
Users that are interested in vde are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- AutoEncoder for Multivariate Time Series☆26Jul 6, 2017Updated 9 years ago
- Enhanced protein mutational sampling using time-lagged variational autoencoders☆30Sep 17, 2018Updated 7 years ago
- Keras framework for autocovariance-based dimensionality reduction of time series data with deep neural networks.☆31Jan 24, 2018Updated 8 years ago
- Statistical models for biomolecular dynamics☆168Jan 26, 2021Updated 5 years ago
- How to analyze molecular dynamics data with PyEMMA☆88May 29, 2019Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Winter is coming...☆14Jan 23, 2019Updated 7 years ago
- Lstm variational auto-encoder for time series anomaly detection and features extraction☆339Jun 24, 2020Updated 6 years ago
- Analyze correlated motions in MD trajectories with only a few lines of Python.☆33Jan 17, 2018Updated 8 years ago
- A general small molecule force field descended from AMBER99 and parm@Frosst, available in the SMIRNOFF format☆31Feb 18, 2026Updated 6 months ago
- Automated omics-scale protein modeling and simulation setup.☆53Sep 20, 2021Updated 4 years ago
- Sequence-to-sequence autoencoder for unsupervised learning of nonlinear dynamics (Tensorflow).☆30Dec 29, 2021Updated 4 years ago
- A python framework to run adaptive Markov state model (MSM) simulation on HPC resources☆17Aug 1, 2025Updated last year
- Differentiate all the things!☆178Jan 9, 2026Updated 7 months ago
- Graph Inference on MoLEcular Topology☆26Mar 25, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Variational Recurrent Autoencoder for timeseries clustering in pytorch☆492Jul 6, 2023Updated 3 years ago
- A CNN + Auto-Encoder Approach for Predicting Financial Time-Series☆12May 16, 2019Updated 7 years ago
- Modeling and Bayesian analysis of fluorescence and absorbance assays.☆19Sep 20, 2021Updated 4 years ago
- Differentiable molecular simulation of proteins with a coarse-grained potential☆56Apr 3, 2025Updated last year
- Code for the results of the Paper:☆21May 17, 2018Updated 8 years ago
- Auto encoder for time series☆441Nov 8, 2019Updated 6 years ago
- Learning free energy landscapes using artificial neural networks☆15Nov 30, 2017Updated 8 years ago
- Autoregressive Energy Machines☆78Nov 22, 2022Updated 3 years ago
- An open, extensible Python framework for GPU-accelerated alchemical free energy calculations.☆203Jul 6, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Python implementation of the multistate Bennett acceptance ratio (MBAR)☆315Feb 12, 2026Updated 6 months ago
- Molecular dynamics trajectory analysis in Tensorflow☆37Jun 21, 2017Updated 9 years ago
- Autoregressive model for solving statistical mechanics problems☆11Mar 19, 2021Updated 5 years ago
- Modeling molecular ensembles with scalable data structures and parallel computing☆37Mar 11, 2026Updated 5 months ago
- TensorFlow implementation of the SOM-VAE model as described in https://arxiv.org/abs/1806.02199☆198Mar 24, 2023Updated 3 years ago
- Python library for analysis of time series data including dimensionality reduction, clustering, and Markov model estimation☆886Jun 26, 2026Updated 2 months ago
- Unsupervised Scalable Representation Learning for Multivariate Time Series: Experiments☆404Jul 31, 2024Updated 2 years ago
- Predict allosteric pockets on proteins☆15Mar 28, 2022Updated 4 years ago
- Tensorflow + Molecules = TensorMol☆277Feb 11, 2021Updated 5 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Generate canonical molecule identifiers for quantum chemistry database☆23May 17, 2021Updated 5 years ago
- Scripts to interface TorchANI NNP with NAMD☆33Apr 28, 2026Updated 4 months ago
- Neural-Network representation of Quantum Systems☆43Apr 29, 2020Updated 6 years ago
- TorchANI 2.0 is an open-source library that supports training, development, and research of ANI-style neural network interatomic potentia…☆554Aug 18, 2026Updated last week
- Tools for preparation and analysis of systems for molecular dynamics.☆32Dec 5, 2025Updated 8 months ago
- Folding@home GPU benchmark☆35Jan 9, 2023Updated 3 years ago
- Suite of programs to perform non-linear dimensionality reduction -- sketch-map in particular☆48Sep 30, 2024Updated last year