Succinct, compact, and compressed data structures for data-intensive applications
☆62Sep 25, 2020Updated 5 years ago
Alternatives and similar repositories for succinct
Users that are interested in succinct are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools for indexing gzip files to support random-like access.☆28Mar 15, 2021Updated 5 years ago
- ☆15Nov 19, 2020Updated 5 years ago
- Inquest lets you add log statements to python without restarting your python instance. It helps you quickly uncover what is going wrong.☆130Jan 24, 2023Updated 3 years ago
- A high performance python hash table library that is generally faster and consumes significantly less memory than Python Dictionaries☆214Sep 3, 2023Updated 2 years ago
- Streaming sequence classification with web services ✓📌☆19Dec 8, 2022Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- An optimal space run-length Burrows-Wheeler transform full-text index☆27Oct 28, 2021Updated 4 years ago
- Day 2 of ACAD's 2018 Advanced Bioinformatics Workshop☆12Nov 27, 2018Updated 7 years ago
- A free, Python proxy server running on AWS lambda☆42Mar 29, 2020Updated 6 years ago
- Rust in bioinformatics and computational biology☆19Oct 22, 2022Updated 3 years ago
- AWS lambda S3 + rust-htslib: A serverless bioinformatics example☆14Jun 7, 2022Updated 3 years ago
- GitHub Action to assume an AWS IAM role and export the credentials to ENV☆17Mar 10, 2024Updated 2 years ago
- A lightweight, event-driven, pipeline framework.☆62Aug 20, 2024Updated last year
- A utility for labeling clusters of text data.☆28Aug 30, 2021Updated 4 years ago
- ☆10Jun 16, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- One simple way of parsing configs.☆59Apr 13, 2026Updated last month
- Sketch-based surveillance platform☆14Dec 17, 2024Updated last year
- Build sourmash databases for genbank.☆10May 4, 2023Updated 3 years ago
- my PhD thesis☆36Jul 10, 2019Updated 6 years ago
- Variant call adjudication☆17Jun 13, 2024Updated last year
- The python binding for D4 format☆16Oct 22, 2021Updated 4 years ago
- ☆14Oct 14, 2020Updated 5 years ago
- VCF Zarr Specification☆16Mar 18, 2026Updated 2 months ago
- Freelance bioinformaticians directory☆10Feb 10, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Golden tests for command-line interfaces.☆19Apr 2, 2026Updated last month
- A Rust implementation of the Quad Wavelet Tree☆52Apr 27, 2026Updated last month
- Simplify and render Template Haskell☆18Aug 19, 2018Updated 7 years ago
- 🐍 A quick and easy way to distribute your Python projects!☆162Oct 24, 2023Updated 2 years ago
- CLI tool for signing SSH public keys using the Vault SSH endpoint☆12Dec 8, 2022Updated 3 years ago
- A graph-inspired data structure for determining likely chains of sequences from breadcrumbs of evidence☆17Jun 29, 2021Updated 4 years ago
- haplotypes genotypes and alleles example decision synthesizer☆20Jun 13, 2019Updated 6 years ago
- Samwell: a python package for using genomic files... well☆20Jun 28, 2022Updated 3 years ago
- ☆17Dec 7, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- toolkit for file system virtualisation of random access compressed FASTA, FAI, DICT & TWOBIT files☆22Apr 24, 2026Updated last month
- A tool that lets you quickly flip through images in a local directory and record notes or answer questions about each one.☆21Jan 4, 2026Updated 4 months ago
- Modern compiler implementation in ML, in Haskell☆16Apr 4, 2018Updated 8 years ago
- Wave Partial Differential Equation Solver in Python☆14Jun 5, 2024Updated last year
- Header-only, gzread-like reader for gzip, bz2, and xz.☆11Aug 8, 2018Updated 7 years ago
- fast Rust-based SVMlight parser☆11Feb 19, 2021Updated 5 years ago
- Tools for working FASTQ files from sequencers (R1/R2/I1/I2)☆12Dec 6, 2024Updated last year