martinpilat / CImethodsView external linksLinks
Teaching materials for the seminar on Application of Computational Intelligence Methods
☆15Nov 29, 2024Updated last year
Alternatives and similar repositories for CImethods
Users that are interested in CImethods are comparing it to the libraries listed below
Sorting:
- Deep Learning Seminar -- ÚFAL course NPFL117☆17Nov 22, 2022Updated 3 years ago
- Biological Relationships - Biorels data preparation infrastructure for biology and drug discovery☆14May 19, 2025Updated 8 months ago
- #SharingIsCaring #CaringIsSharing☆89Jan 8, 2025Updated last year
- download all oral & spotlight papers from neurips, iclr, icml or any openreview conference☆20Dec 6, 2025Updated 2 months ago
- ☆10Sep 17, 2024Updated last year
- DockCADD An automated computational framework for molecular docking☆15Mar 9, 2025Updated 11 months ago
- ☆10Apr 30, 2025Updated 9 months ago
- NPFL129 repository☆44Jan 9, 2026Updated last month
- Implementation of the Pairformer model used in AlphaFold 3☆14Feb 9, 2026Updated last week
- The central entry point to the P2Rank project with links to the individual projects, including references to documentation, datasets, etc…☆13May 23, 2025Updated 8 months ago
- PREVENT: PRotein Engineering by Variational frEe eNergy approximaTion☆13Jul 4, 2024Updated last year
- Python implementation of 3D Zernike moments with NumPy☆15Sep 28, 2024Updated last year
- Metal and Water prediction☆13Feb 5, 2025Updated last year
- ☆13Mar 17, 2024Updated last year
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- GatorAffinity: Boosting Protein-Ligand Binding Affinity Prediction with Large-Scale Synthetic Structural Data☆25Dec 5, 2025Updated 2 months ago
- Program to find drug-like RNA-ligand binding pockets.☆20Aug 5, 2025Updated 6 months ago
- Coarse-grained and Multi-dimensional Data-driven molecular generation (CMD-GEN). This framework bridges three-dimensional ligand-protein …☆16Sep 13, 2025Updated 5 months ago
- Deep Learning model for protein and ligand complex structure prediction from sequences and SMILES☆12Oct 31, 2023Updated 2 years ago
- Quantum-mechanical molecular representations☆26Jan 27, 2026Updated 3 weeks ago
- Detect and characterize binding pockets from molecular simulations.☆14Jul 3, 2025Updated 7 months ago
- Webserver & command-line tool for search of APO (unbound) protein structures from HOLO (bound) forms and vice versa. http://apoholo.cz☆14Jun 14, 2024Updated last year
- Semantic Segmentor for Protein Structures.☆11Dec 20, 2021Updated 4 years ago
- some tools for working with protein (PDB) files in tensorflow☆11Jul 9, 2019Updated 6 years ago
- ☆15Aug 13, 2023Updated 2 years ago
- A simple utility for Chemists that integrates with Windows Explorer and provides Thumbnail, Preview, Search and other useful features for…☆12May 1, 2015Updated 10 years ago
- Mol* Volumes and Segmentations Extension☆12Mar 16, 2025Updated 11 months ago
- Clustering of SES virtual probes for pocket generation and ranking via Isolation Forest☆14Mar 22, 2023Updated 2 years ago
- Taxonomy of Benchmarks in Graph Representation Learning☆21Dec 1, 2022Updated 3 years ago
- few-shot compound activity regression☆13Aug 19, 2024Updated last year
- The java implementation of the MMTF API, decoder and encoder.☆11Dec 19, 2025Updated last month
- A Python tool for creating and downsampling chemical pointclouds.☆12Apr 18, 2025Updated 9 months ago
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆13Updated this week
- ☆12Apr 4, 2025Updated 10 months ago
- Traces multiple color images using potrace. This is similar to Inkscape's Trace Bitmap function.☆10Jul 27, 2017Updated 8 years ago
- ☆13Nov 26, 2024Updated last year
- Bacting is an open-source platform for chemo- and bioinformatics based on Bioclipse that defines a number of common domain objects and wr…☆17Jan 5, 2026Updated last month
- ☆18Jan 11, 2026Updated last month
- Deep Learning tools For Biology☆10Apr 18, 2022Updated 3 years ago