louisblankemeier / Merlin
Merlin is a 3D VLM for computed tomography that leverages both structured electronic health records (EHR) and unstructured radiology reports for pretraining.
☆24Updated 4 months ago
Related projects ⓘ
Alternatives and complementary repositories for Merlin
- ☆52Updated 10 months ago
- ☆35Updated last year
- ECCV 2024 & GenerateCT: Text-Conditional Generation of 3D Chest CT Volumes☆137Updated 4 months ago
- Developing Generalist Foundation Models from a Multimodal Dataset for 3D Computed Tomography☆16Updated last month
- ☆135Updated 2 months ago
- MICCAI 2024 & CT2Rep: Automated Radiology Report Generation for 3D Medical Imaging☆62Updated 4 months ago
- [NeurIPS 2024] Touchstone - Benchmarking AI on 5,172 o.o.d. CT volumes and 9 anatomical structures☆67Updated last week
- The official repository for "One Model to Rule them All: Towards Universal Segmentation for Medical Images with Text Prompts"☆152Updated last week
- MedShapeNet - A Large-Scale Dataset of 3D Medical Shapes for Computer Vision☆71Updated 8 months ago
- [NeurIPS 2023] AbdomenAtlas 1.0 (5,195 CT volumes + 9 annotated classes)☆217Updated last week
- Implemention of the Paper "MultiTalent: A Multi-Dataset Approach to Medical Image Segmentation"☆49Updated 10 months ago
- The official repository of the 2023 Kidney Tumor Segmentation Challenge (KiTS23)☆81Updated 8 months ago
- ☆59Updated 5 months ago
- A 3D medical Detection Transformer library. Papers accepted @ MIDL22 & MELBA23/02.☆51Updated 4 months ago
- This is the repository of Quality Sentinel, a label quality evaluation model for medical image segmentation.☆20Updated 3 months ago
- This repository is the official implementation of vox2vec: A Framework for Self-supervised Contrastive Learning of Voxel-level Representa…☆23Updated last month
- ☆36Updated 8 months ago
- MICCAI 2024: nnUNet incorporating additional baselines as SAMed️, Mamba Variants, and MedNeXT to establish a benchmark for segmentation c…☆65Updated 2 months ago
- Machine learning models for multi-organ, multi-disease prediction in chest CT volumes. From paper Draelos et al. "Machine-Learning-Based …☆28Updated last year
- X-ray2CTPA: Generating 3D CTPA scans from 2D X-ray conditioning☆16Updated 4 months ago
- Repository for the Universal Lesion Segmentation Challenge '23☆28Updated 6 months ago
- Developing Generalist Foundation Models from a Multimodal Dataset for 3D Computed Tomography☆195Updated 3 weeks ago
- ☆56Updated last year
- The official repository to build SAT-DS, a medical data collection of 72 public segmentation datasets, contains over 22K 3D images, 302K …☆73Updated last month
- AMOS: A Large-Scale Abdominal Multi-Organ Benchmark for Versatile Medical Image Segmentation☆26Updated last year
- Evaluating DINOv2 for Radiology☆40Updated 10 months ago
- ☆42Updated 7 months ago
- Pytorch implementation of NASDM: Nuclei-Aware Semantic Histopathology Image Generation Using Diffusion Models☆18Updated 6 months ago
- Official Code Release for "Adapting Pre-trained Vision Transformers from 2D to 3D through Weight Inflation Improves Medical Image Segment…☆45Updated last year
- Config-based framework for organized and reproducible deep learning. MONAI Bundle + PyTorch Lightning.☆22Updated last week