kevinniechen / quagmir
isomiR quantification and analysis pipeline
☆9Updated 6 years ago
Related projects ⓘ
Alternatives and complementary repositories for quagmir
- Send messages online through Firebase☆9Updated 4 months ago
- (Winner | Capital One) A Yelp search app that summarizes reviews using Watson and Aylien Text API☆12Updated 7 years ago
- (1st place at HopHacks) A dynamic webVR memory palace for speech training, utilizing natural language processing and Google Streetview AP…☆15Updated 6 years ago
- blend4j is a JVM partial reimplementation of the Python library bioblend for interacting with Galaxy, CloudMan, and BioCloudCentral.☆16Updated 2 years ago
- Probabilistic single-cell pseudotime with Edward+Tensorflow☆12Updated 7 years ago
- An alignment-free approach to estimating exon-inclusion ratios without a reference transcriptome☆10Updated 5 years ago
- Find bimodal, unimodal, and multimodal features in your data☆27Updated 6 years ago
- Human Primary T cells: A Practical Guide☆15Updated 6 years ago
- ☆33Updated 6 years ago
- Signed LD profile regression code☆17Updated 2 years ago
- Software Pipeline for Integrative Genetic Association Analysis: Probabilistic Assessment of Enrichment and Colocalization☆24Updated 5 years ago
- A useful tool for shuffling biological sequences while preserving the k-let counts☆13Updated 7 months ago
- Theano-based Deep Learning library (convnets, recurrent neural networks, and more).☆14Updated 7 years ago
- Ranked vaccine peptides for personalized cancer immunotherapy☆54Updated last month
- Flexible and efficient tests for evidence of positive selection anywhere in the cancer genome.☆24Updated 2 years ago
- Exon-exon splice junctions across SRA☆39Updated 3 years ago
- CliXO algorithm implementation version 0.3 (doi: 10.1093/bioinformatics/btu282)☆9Updated 6 years ago
- Sync changes in Paperpile to a Notion database.☆14Updated 2 years ago
- RT2 Lab website, built with Jekyll.☆11Updated last year
- Training and testing of DeepSEA models.☆14Updated 9 years ago
- Wasserstein Generative Adversarial Network for analysing scRNAseq data☆34Updated 3 years ago
- BitSeq code☆16Updated 3 years ago
- Computational biology utility scripts☆19Updated 4 months ago
- Predict cell cycle phase in a continuum from single-cell RNA-seq data☆12Updated 4 years ago
- ML w/ ProbProg: final project repository template☆9Updated last year
- Use gene expression to predict phenotype sample information☆19Updated 6 years ago
- Ensemble Learning for Harmonization and Annotation of Single Cells (ELeFHAnt) provides an easy to use R package for users to annotate clu…☆20Updated 2 years ago
- Python implementation of TEISER also capable of using SHAPE structural probing data☆12Updated 2 years ago
- Maximum mean discrepancy comparisons for single cell profiling experiments☆15Updated 2 years ago
- Code for Scott and Zhang, Nature Medicine manuscript on implications of human genetic variation for therapeutic genome editing☆8Updated 7 years ago