cuDTW++: Ultra-Fast Dynamic Time Warping on CUDA-enabled GPUs
☆34May 11, 2020Updated 6 years ago
Alternatives and similar repositories for cuDTW
Users that are interested in cuDTW are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- genome sequence alignment☆14Oct 9, 2019Updated 6 years ago
- CARE: Context-Aware Read Error correction for Illumina reads☆21Nov 1, 2023Updated 2 years ago
- CUDASW++4.0: Ultra-fast GPU-based Smith-Waterman Protein Sequence Database Search☆46Dec 10, 2025Updated 6 months ago
- GPU-accelerated Dynamic Time Warp (DTW) Barycenter Averaging☆70Jul 24, 2025Updated 10 months ago
- memory efficient, fast & precise taxnomomic classification system for metagenomic read mapping☆64Jan 22, 2026Updated 4 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Code for the paper Aligning Distant Sequences to Graphs using Long Seed Sketches.☆13Nov 1, 2022Updated 3 years ago
- The new version is available at https://github.com/RabbitBio/RabbitQCPlus☆25Jun 20, 2022Updated 3 years ago
- An Fast variant calling tool to detection germline and somatic variants☆12Feb 21, 2026Updated 3 months ago
- RabbitKSSD: accelerating genome distance estimation on modern multi-core architectures☆12Jun 5, 2024Updated 2 years ago
- GDTW is a Python/C++ library that performs dynamic time warping. It is based on a paper by Dave Deriso and Stephen Boyd.☆42May 23, 2026Updated 2 weeks ago
- gossip: Efficient Communication Primitives for Multi-GPU Systems☆62Jul 1, 2022Updated 3 years ago
- generic C++ containers; matrix, triangle matrix, crs sparse matrix, etc.☆12Mar 23, 2018Updated 8 years ago
- Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)☆20Jun 22, 2023Updated 2 years ago
- Elastic and fault tolerant parallel map and parallel map reduce methods. Part of the COFII framework.☆16Jun 3, 2026Updated last week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Slurm Examples☆10Aug 30, 2024Updated last year
- This repository introduces the NICT Darknet Dataset 2022 https://csdataset.nict.go.jp/darknet-2022/☆11Sep 29, 2023Updated 2 years ago
- A more efficient quality control tool for sequencing data☆33May 27, 2025Updated last year
- Punctuation text objects: ci/ da; vi@ yiq da<space> ...☆37Oct 18, 2013Updated 12 years ago
- A Library for fast Hash Tables on GPUs☆133Oct 14, 2025Updated 7 months ago
- Performance Benchmark Recipes for Power-based systems☆14Apr 12, 2019Updated 7 years ago
- Test of parallel compression acceleration☆16Sep 8, 2024Updated last year
- Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data☆31Feb 7, 2026Updated 4 months ago
- Scalable and accurate classifier for time series☆31May 2, 2019Updated 7 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An open source time series library for Python implementing Matrix Profile☆23Jul 31, 2018Updated 7 years ago
- ☆13Jun 12, 2021Updated 4 years ago
- Julia wrapper for Devito functionality. Part of the COFII framework.☆12May 4, 2026Updated last month
- Dynamic Time Warping in C and Python☆36Sep 3, 2017Updated 8 years ago
- JavaSeis IO implementation for the Julia language☆15Feb 11, 2026Updated 3 months ago
- Go port of wyhash v3☆14Nov 1, 2022Updated 3 years ago
- JPEG image codec that uses SIMD instructions (MMX, SSE2, NEON, AltiVec) to accelerate baseline JPEG compression and decompression on x86,…☆10Apr 15, 2026Updated last month
- ProbMinHash – A Class of Locality-Sensitive Hash Algorithms for the (Probability) Jaccard Similarity☆44Oct 26, 2020Updated 5 years ago
- elPrep reimplementations in C++ and Java, only for benchmark comparisons☆10Feb 13, 2023Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Cellular autotmata screensaver with a colourful rock-paper-scissors implementation.☆12Mar 8, 2015Updated 11 years ago
- SetSketch: Filling the Gap between MinHash and HyperLogLog☆49Aug 11, 2021Updated 4 years ago
- K-mer substring space decomposition☆44May 27, 2026Updated 2 weeks ago
- Efficient, parallel compression for terabyte-scale data☆63Feb 25, 2026Updated 3 months ago
- Simple distribute job scheduler for multiple servers with only SSH. No additions.☆10Dec 8, 2022Updated 3 years ago
- DBA: Averaging for Dynamic Time Warping☆199Apr 22, 2026Updated last month
- 按萨尼.《数据结构、算法与应用C++语言描述第二版》一书的脉络介绍算法与数据结构的相关知识,并按课后习题和实际 工程要求丰富有关数据结构类的功能。微信公众号地震成像与模拟中的专辑《算法与数据结构》中文章给出了每个测试例子的说明。☆18Aug 8, 2021Updated 4 years ago