Yijia-Xiao / Know2BIO
Know2BIO: A Comprehensive Dual-View Benchmark for Evolving Biomedical Knowledge Graphs
☆12Updated last year
Alternatives and similar repositories for Know2BIO:
Users that are interested in Know2BIO are comparing it to the libraries listed below
- Codes for paper: Mixture-of-Partitions: Infusing Large Biomedical Knowledge Graphs into BERT☆33Updated 2 years ago
- Are LLMs Capable of Data-based Statistical and Causal Reasoning? Benchmarking Advanced Quantitative Reasoning with Data☆35Updated this week
- Pre-trained Language Model for Scientific Text☆44Updated last year
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆55Updated last year
- LLM for Scientific Research Survey☆50Updated 3 weeks ago
- BioT5 (EMNLP 2023) and BioT5+ (ACL 2024 Findings)☆103Updated 5 months ago
- Structured Chemistry Reasoning with Large Language Models☆32Updated 9 months ago
- A curated list of papers on LLMs and agents for scientific research and development☆33Updated 2 months ago
- The Open Source Code for LLM4SD (Large Language Models for Scientific Synthesis, Inference and Explanation)☆32Updated last month
- Source code for "A Deep-learning System Bridging Molecule Structure and Biomedical Text with Comprehension Comparable to Human Profession…☆84Updated last year
- SRTK: Retrieve semantic-relevant subgraphs from large-scale knowledge graphs☆26Updated 4 months ago
- This repo is for the Open Protein Instructions (OPI) project, aiming to build and release a high-quality and comprehensive protein instru…☆4Updated this week
- This repository contains information on the creation, evaluation, and benchmark models for the L+M-24 Dataset. L+M-24 will be featured as…☆26Updated 3 weeks ago
- [EMNLP 2023] ReLM: Leveraging Language Models for Enhanced Chemical Reaction Prediction.☆18Updated last year
- [ACL 2024] ProtLLM: An Interleaved Protein-Language LLM with Protein-as-Word Pre-Training☆40Updated 11 months ago
- Official Code Repository for the paper "KALA: Knowledge-Augmented Language Model Adaptation" (NAACL 2022)☆36Updated last year
- In-BoXBART: Get Instructions into Biomedical Multi-task Learning☆14Updated 2 years ago
- Must-read papers on NLP for science.☆58Updated last year
- Repository for Text2Mol: Cross-Modal Molecular Retrieval with Natural Language Queries☆42Updated last year
- [EMNLP-2022 Findings] Code for paper “ProGen: Progressive Zero-shot Dataset Generation via In-context Feedback”.☆26Updated 2 years ago
- PyTorch codes for the paper "An Empirical Study of Multimodal Model Merging"☆38Updated last year
- ☆9Updated 2 years ago
- Official code repo for the paper "LlaSMol: Advancing Large Language Models for Chemistry with a Large-Scale, Comprehensive, High-Quality …☆76Updated 3 months ago
- Retrieved Sequence Augmentation for Protein Representation Learning☆50Updated last year
- Code and data for the ACL2024 paper "InstructProtein: Aligning Human and Protein Language via Knowledge Instruction".☆15Updated 5 months ago
- [ACL 2024 Findings] This is the code for our paper "Knowledge-Infused Prompting: Assessing and Advancing Clinical Text Data Generation wi…☆38Updated 7 months ago
- [EMNLP 2024] Official implementation of "Hierarchical Deconstruction of LLM Reasoning: A Graph-Based Framework for Analyzing Knowledge Ut…☆21Updated 2 months ago
- Multimodal Transformers for biomedical text and Knowledge Graph data☆33Updated last year
- Official Code Repository for Knowledge-Augmented Language Model Verification (EMNLP 2023)☆28Updated last year