Yijia-Xiao / Know2BIOLinks
Know2BIO: A Comprehensive Dual-View Benchmark for Evolving Biomedical Knowledge Graphs
☆13Updated last year
Alternatives and similar repositories for Know2BIO
Users that are interested in Know2BIO are comparing it to the libraries listed below
Sorting:
- Codes for paper: Mixture-of-Partitions: Infusing Large Biomedical Knowledge Graphs into BERT☆34Updated 3 years ago
- ☆25Updated last year
- EMNLP'2021: Can Language Models be Biomedical Knowledge Bases?☆57Updated 2 years ago
- Retrieved Sequence Augmentation for Protein Representation Learning☆52Updated last year
- Are LLMs Capable of Data-based Statistical and Causal Reasoning? Benchmarking Advanced Quantitative Reasoning with Data☆38Updated 4 months ago
- In-BoXBART: Get Instructions into Biomedical Multi-task Learning☆14Updated 2 years ago
- BioT5 (EMNLP 2023) and BioT5+ (ACL 2024 Findings)☆114Updated 9 months ago
- Dataset for the paper "GenWiki: A Dataset of 1.3 Million Content-Sharing Text and Graphs for Unsupervised Graph-to-Text Generation"☆25Updated last year
- This repository contains information on the creation, evaluation, and benchmark models for the L+M-24 Dataset. L+M-24 will be featured as…☆28Updated 5 months ago
- Pre-trained Language Model for Scientific Text☆45Updated last year
- Code for paper "Open-Domain Hierarchical Event Schema Induction by Incremental Prompting and Verification"☆15Updated last year
- PyTorch codes for the paper "An Empirical Study of Multimodal Model Merging"☆37Updated last year
- Source code for "A Deep-learning System Bridging Molecule Structure and Biomedical Text with Comprehension Comparable to Human Profession…☆89Updated last year
- Bio relation extraction labeled dataset☆45Updated 3 years ago
- Official Code Repository for the paper "KALA: Knowledge-Augmented Language Model Adaptation" (NAACL 2022)☆35Updated last year
- ☆16Updated 3 months ago
- ☆11Updated last year
- This repository lists papers, codes, and datasets in Biomedical Text Summarisation based on PLM☆23Updated 2 years ago
- official repo of AAAI2024 paper Mitigating the Impact of False Negatives in Dense Retrieval with Contrastive Confidence Regularization☆13Updated last year
- Wasserstein-Fisher-Rao Embedding: Logical Query Embeddings with Local Comparison and Global Transport (Findings-ACL 2023)☆13Updated 2 years ago
- ICLR'24 | BioBridge: Bridging Biomedical Foundation Models via Knowledge Graphs☆74Updated last year
- Cross-domain data integration for named entity disambiguation in biomedical text☆11Updated 3 years ago
- SRTK: Retrieve semantic-relevant subgraphs from large-scale knowledge graphs☆29Updated 9 months ago
- A specialized LLM for study search, study screening, and data extraction from medical literature.☆10Updated 3 months ago
- Code for CTO: A Large Clinical Trial Outcome and QA Dataset☆24Updated 3 months ago
- ☆23Updated 3 years ago
- BioMedBERT: A Pre-trained Biomedical Language Model for QA and IR☆28Updated 4 years ago
- Code of "Instruction Multi-Constraint Molecular Generation Using a Teacher-Student Large Language Model"☆13Updated 11 months ago
- [ACL 2024] ProtLLM: An Interleaved Protein-Language LLM with Protein-as-Word Pre-Training☆47Updated last year
- ☆21Updated 3 months ago