A minimal, strictly structured Python project template
☆15Apr 26, 2023Updated 3 years ago
Alternatives and similar repositories for Python-Project-Template
Users that are interested in Python-Project-Template are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Flexible workflow designed for bacterial WGS analyses (annotation, core/pan-genome reconstruction, phylogeny)☆12Aug 6, 2023Updated 2 years ago
- Utilities to detect and profile `het-kmers`☆12Aug 5, 2024Updated last year
- (In development) Microservices full-stack single-page web app built with Typescript, React, Redux, Styled Components (for CSS-in-JS), Pyt…☆11Updated this week
- A tool to analyze telomeric reads from WGS or telobait-capture long-read sequencing data☆10Oct 1, 2024Updated last year
- Long read to reference genome mapping tool☆13Mar 14, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆10Mar 4, 2025Updated last year
- GpC methylation from fast5:s to reference anchored calls☆10Nov 18, 2020Updated 5 years ago
- Adaptive haplotype assembly for efficiently leveraging high coverage in long reads☆13Sep 4, 2018Updated 7 years ago
- Provides easy read/write access to genomic tracks☆22Mar 18, 2016Updated 10 years ago
- luigi based workflow for analysising WGS samples collecting from different source. It will auto clustering, annotating gene or species, a…☆10Nov 28, 2023Updated 2 years ago
- A Cytoscape.js extension generator☆10Jan 16, 2018Updated 8 years ago
- View component for Vega visualizations.☆21Dec 20, 2018Updated 7 years ago
- Predict DNA assembly clone validity rates - powered by Kappa☆10Jul 24, 2020Updated 5 years ago
- A tool set to assess the quality of the per read phasing and reduce the errors.☆13Jun 25, 2020Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Here we proposed two novel algorithms, the Direct Subsequence Dynamic Time Warping for nanopore raw signal search (DSDTWnano) and the con…☆10Jul 13, 2020Updated 5 years ago
- The Dagstuhl Format for Assembly☆13Oct 16, 2017Updated 8 years ago
- Computer-Aided Process Planner (CAPP) for Synthetic Biology Research☆11Jun 1, 2021Updated 5 years ago
- HiFi error modeler and simulator with ploidy☆12Feb 12, 2026Updated 3 months ago
- Boilerplate(cookiecutter) files for your new (or existing!) python project☆11Dec 14, 2020Updated 5 years ago
- Split a BAM file by haplotype support☆16Dec 13, 2017Updated 8 years ago
- A python program that uses ReadBack phased haplotypes in population of samples and returns extended haplotype blocks.☆15Oct 30, 2024Updated last year
- End-guided RNA assembler☆15Dec 2, 2025Updated 6 months ago
- An efficient genetic data imputation pipeline☆13Apr 7, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A collaborative notebook for genes and genomes☆13Updated this week
- SLICER algorithm for inferring cell trajectories. See details in Welch et al., Genome Biology 2016: http://genomebiology.biomedcentral.co…☆16Oct 17, 2017Updated 8 years ago
- Neo4j Slack Integration Demo☆13Jun 25, 2015Updated 10 years ago
- INC-Seq: Accurate single molecule reads using nanopore sequencing☆16Sep 11, 2020Updated 5 years ago
- ☆17Feb 19, 2026Updated 3 months ago
- A Python molecular biology CAD tool with a dead-simple user interface☆13Dec 8, 2022Updated 3 years ago
- Finding Maximal Exact Matches (MEMs) using a Sampled LCP Array☆10Mar 7, 2024Updated 2 years ago
- DNA overhang misannealing data for Python☆13May 15, 2025Updated last year
- Toolkit for Modelling and Simulation of Gene Expressions and Metabolism☆13Apr 1, 2026Updated 2 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- An automated pipeline for processing DamID sequencing datasets☆16Aug 28, 2025Updated 9 months ago
- Haploidy and Size Completeness Estimation☆14Apr 11, 2024Updated 2 years ago
- Published methods☆15Oct 19, 2016Updated 9 years ago
- Multi-nucleotide variants (MNVs) in gnomAD 2.1☆13May 15, 2026Updated 3 weeks ago
- 💫 Computer-aided DNA assembly validation and identification from restriction digests.☆15May 29, 2025Updated last year
- Pipeline code for creating a fully haplotype-resolved assembly from a combination of PacBio/ONT long reads and Illumina Strand-seq data☆16Apr 2, 2024Updated 2 years ago
- ☆16Mar 16, 2017Updated 9 years ago