A C++ header only interval tree implementation.
☆73Jun 25, 2026Updated last week
Alternatives and similar repositories for interval-tree
Users that are interested in interval-tree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a minimal C++ interval tree implementation☆237Mar 11, 2021Updated 5 years ago
- A 3D adaptation of the state-of-the-art sparrow nesting algorithm☆30Jun 3, 2026Updated last month
- A C/C++ library for fast interval overlap queries (with a "bedtools coverage" example)☆172May 28, 2024Updated 2 years ago
- Support for С++20 std::stop_token to interrupt the blocking Linux syscalls without throwing any exception.☆20Jul 6, 2020Updated 5 years ago
- AArch64 assembler/disassembler support☆11Sep 7, 2017Updated 8 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A fast C++ Madelbrot renderer using AVX2 extensions☆13Oct 7, 2022Updated 3 years ago
- Augmented interval list (AIList): a novel data structure for efficient genomic interval search☆23Aug 29, 2022Updated 3 years ago
- Tool to flag foldback and chimeric artifacts in long-read sequence alignment files☆41Apr 28, 2026Updated 2 months ago
- SIMD sorting network generator and very basic tester☆16Apr 2, 2022Updated 4 years ago
- MPI version of CosmoGRaPH Code☆16Sep 7, 2021Updated 4 years ago
- Fast FASTA/Q parser and writer (C++ re-implementation of kseq library)☆57Mar 4, 2024Updated 2 years ago
- A SIMD-accelerated library to compute random minimizers☆46Apr 6, 2026Updated 2 months ago
- Augmented Interval Tree implemented in Cython/C☆20Apr 13, 2026Updated 2 months ago
- A set of memory allocators for use with the C++ Standard Template Library☆27Sep 26, 2025Updated 9 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Structural variant pipeline☆18Jun 25, 2020Updated 6 years ago
- NCLS. Basically a static interval-tree that is silly fast for both construction and lookups. Deprecated but maintained.☆223Jul 4, 2025Updated last year
- A vector based map that implements a red black tree under the hood. Performs faster insertions and deletions than std::map and has a red…☆13Nov 16, 2024Updated last year
- GCLib - Genomic C++ library of reusable code for bioinformatics projects☆39Apr 10, 2026Updated 2 months ago
- type - Strong types for C++98, C++11 and later in a single-file header-only library☆39Nov 28, 2025Updated 7 months ago
- Cache-friendly associative STL-like container with an Eytzinger (BFS) layout for C++☆32Mar 4, 2026Updated 4 months ago
- Fast and compact locality-preserving minimal perfect hashing for k-mer sets.☆44Nov 18, 2023Updated 2 years ago
- SAPLING: Suffix Array Piecewise Linear INdex for Genomics☆25Sep 1, 2020Updated 5 years ago
- Serialize dict of integers to bytes and read with near zero parsing. Specialization for int to int.☆10Jun 26, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Compresso: Efficient Compression of Segmentation Data For Connectomics☆13Sep 7, 2021Updated 4 years ago
- Functional heterogeneous list (hlist) library for Rust☆11Jun 28, 2020Updated 6 years ago
- Interactive Benchmarking of Persistent Memory Indexes☆15Jan 20, 2023Updated 3 years ago
- A tool to detect structural variant☆17Mar 27, 2023Updated 3 years ago
- Storing and accessing large Julia array locally or in cloud storage without server.☆13Jan 29, 2022Updated 4 years ago
- An exact algorithm for the maximum clique problem (MCP) which improves over state-of-the-art approaches in some cases by orders of magnit…☆18Nov 15, 2025Updated 7 months ago
- All-in-one baby care: Track, Feed, Sleep, and Grow Together. Sara is an open-source Flutter app designed to make parenting easier by hel…☆24Apr 13, 2026Updated 2 months ago
- Plain-text macro expander with React-inspired widgets. Markdown with steroids.☆13Oct 29, 2020Updated 5 years ago
- Ultra-efficient mapping-free structural variation genotyper☆20Jul 28, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ScheduleOpt benchmarks☆30Jun 27, 2026Updated last week
- Mesh generation from sparse matrices☆23Nov 5, 2025Updated 8 months ago
- Detection and genotyping of structural variants☆21May 27, 2026Updated last month
- ☆14Jun 19, 2025Updated last year
- Development tree for staging core changes☆22Jun 15, 2024Updated 2 years ago
- [MICRO'20] LENS: A Low-level NVRAM Profiler [USENIX Security'23] NVLeak: Off-Chip Side-Channel Attacks via Non-Volatile Memory Systems☆14Jul 8, 2024Updated last year
- SBOM generator for Debian-based distributions☆32Updated this week