A C++ header only interval tree implementation.
☆73Aug 29, 2025Updated 8 months ago
Alternatives and similar repositories for interval-tree
Users that are interested in interval-tree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A red-black self-balancing interval tree☆32Aug 6, 2020Updated 5 years ago
- a minimal C++ interval tree implementation☆238Mar 11, 2021Updated 5 years ago
- A 3D adaptation of the state-of-the-art sparrow nesting algorithm☆27Nov 26, 2025Updated 5 months ago
- A C/C++ library for fast interval overlap queries (with a "bedtools coverage" example)☆170May 28, 2024Updated last year
- AArch64 assembler/disassembler support☆11Sep 7, 2017Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A fast C++ Madelbrot renderer using AVX2 extensions☆13Oct 7, 2022Updated 3 years ago
- Python language bindings for bwa☆12Mar 27, 2026Updated last month
- Augmented interval list (AIList): a novel data structure for efficient genomic interval search☆23Aug 29, 2022Updated 3 years ago
- Tool to flag foldback and chimeric artifacts in long-read sequence alignment files☆39Apr 28, 2026Updated last week
- VANS: A validated NVRAM simulator☆27Nov 22, 2023Updated 2 years ago
- SIMD sorting network generator and very basic tester☆16Apr 2, 2022Updated 4 years ago
- MPI version of CosmoGRaPH Code☆16Sep 7, 2021Updated 4 years ago
- Fast FASTA/Q parser and writer (C++ re-implementation of kseq library)☆57Mar 4, 2024Updated 2 years ago
- Snakemake pipeline for benchmarking read mappers☆16Dec 11, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A SIMD-accelerated library to compute random minimizers☆43Apr 6, 2026Updated last month
- VMSDK implements the Evidence API☆11Nov 25, 2024Updated last year
- Augmented Interval Tree implemented in Cython/C☆20Apr 13, 2026Updated 3 weeks ago
- Structural variant pipeline☆18Jun 25, 2020Updated 5 years ago
- NCLS. Basically a static interval-tree that is silly fast for both construction and lookups. Deprecated but maintained.☆223Jul 4, 2025Updated 10 months ago
- ☆18Apr 1, 2021Updated 5 years ago
- GCLib - Genomic C++ library of reusable code for bioinformatics projects☆39Apr 10, 2026Updated 3 weeks ago
- Automatically exported from code.google.com/p/tx-trie☆29Jun 23, 2015Updated 10 years ago
- Implicit Interval Tree with Interpolation Index☆42Jul 13, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- type - Strong types for C++98, C++11 and later in a single-file header-only library☆39Nov 28, 2025Updated 5 months ago
- Cache-friendly associative STL-like container with an Eytzinger (BFS) layout for C++☆32Mar 4, 2026Updated 2 months ago
- Experimental getopt, gzip reader, FASTA/Q parser and interval queries in nim-lang☆31Apr 20, 2020Updated 6 years ago
- Fast and compact locality-preserving minimal perfect hashing for k-mer sets.☆44Nov 18, 2023Updated 2 years ago
- SAPLING: Suffix Array Piecewise Linear INdex for Genomics☆25Sep 1, 2020Updated 5 years ago
- Interactive Benchmarking of Persistent Memory Indexes☆15Jan 20, 2023Updated 3 years ago
- A tool to detect structural variant☆17Mar 27, 2023Updated 3 years ago
- TopK Algorithms Benchmark☆10Jul 16, 2019Updated 6 years ago
- Ultra-efficient mapping-free structural variation genotyper☆20Jul 28, 2021Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆49Apr 20, 2026Updated 2 weeks ago
- Detection and genotyping of structural variants☆20Apr 2, 2026Updated last month
- Minimum viable Flecs entity component system implementation in Unreal Engine.☆21Oct 29, 2025Updated 6 months ago
- Development tree for staging core changes☆22Jun 15, 2024Updated last year
- SBOM generator for Debian-based distributions☆29Apr 29, 2026Updated last week
- [MICRO'20] LENS: A Low-level NVRAM Profiler [USENIX Security'23] NVLeak: Off-Chip Side-Channel Attacks via Non-Volatile Memory Systems☆14Jul 8, 2024Updated last year
- Alfred Workflow to convert hex string to assembly and vice versa☆24Dec 12, 2016Updated 9 years ago